RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TM4SF19Q96DZ7 209 aa22.78■■□□□ 1.24
SNX3-203ENST00000368979 MYNNQ9NPC7 610 aa22.78■■□□□ 1.24
SNX3-203ENST00000368979 CROTQ9UKG9 612 aa22.78■■□□□ 1.24
SNX3-203ENST00000368979 KNL1Q8NG31 2342 aa22.78■■□□□ 1.24
SNX3-203ENST00000368979 A0A0J9YVX5 310 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 SCAMP2O15127 329 aaKnown RBP22.77■■□□□ 1.24
SNX3-203ENST00000368979 CAPN5O15484 640 aaPredicted RBP22.77■■□□□ 1.24
SNX3-203ENST00000368979 STATHP02808 62 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 ST6GAL1P15907 406 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 CCT8P50990 548 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 PWP1Q13610 501 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 LPAL2Q16609 132 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 TRMT5Q32P41 509 aaKnown RBP22.77■■□□□ 1.24
SNX3-203ENST00000368979 PGM2L1Q6PCE3 622 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 BNC2Q6ZN30 1099 aaPredicted RBP22.77■■□□□ 1.24
SNX3-203ENST00000368979 NUDT13Q86X67 352 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 OR4C6Q8NH72 309 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 CDC26Q8NHZ8 85 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 C16orf78Q8WTQ4 265 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 QRFPRQ96P65 431 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 TRAPPC9Q96Q05 1148 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 MACROD1Q9BQ69 325 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 GPATCH1Q9BRR8 931 aaKnown RBP22.77■■□□□ 1.24
SNX3-203ENST00000368979 KLHL31Q9H511 634 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 C11orf16Q9NQ32 467 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 GID8Q9NWU2 228 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 EPHA6Q9UF33 1036 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 FAM86C2PA6NEL3 165 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 C4orf51C9J302 202 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 TRIM38O00635 465 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 AKAP10O43572 662 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 PRAMEF10O60809 474 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 ALPPL2P10696 532 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 CDH3P22223 829 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 S100A3P33764 101 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 PHC1P78364 1004 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 ELF3P78545 371 aaPredicted RBP22.77■■□□□ 1.24
SNX3-203ENST00000368979 FOXM1Q08050 763 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 NFYCQ13952 458 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 TOR1AIP1Q5JTV8 583 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 IRGCQ6NXR0 463 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 CAMKMTQ7Z624 323 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 MINDY1Q8N5J2 469 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 OR2L5Q8NG80 312 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 DDX31Q9H8H2 851 aaKnown RBP22.77■■□□□ 1.24
SNX3-203ENST00000368979 C1GALT1Q9NS00 363 aa22.77■■□□□ 1.24
SNX3-203ENST00000368979 EXO1Q9UQ84 846 aaKnown RBP22.77■■□□□ 1.24
SNX3-203ENST00000368979 IGHV1OR21-1A0A087WYE8 117 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 ARHGAP33O14559 1287 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 GALR2O43603 387 aaPredicted RBP22.76■■□□□ 1.23
SNX3-203ENST00000368979 EPN2O95208 641 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 CER1O95813 267 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 NPPAP01160 153 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 HPCAL1P37235 193 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 GPR3P46089 330 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 STXBP1P61764 594 aaKnown RBP22.76■■□□□ 1.23
SNX3-203ENST00000368979 SRSF11Q05519 484 aaKnown RBP22.76■■□□□ 1.23
SNX3-203ENST00000368979 CCNYL2Q5T2Q4 361 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 OR4C11Q6IEV9 310 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 FAM71E1Q6IPT2 247 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 ABHD17CQ6PCB6 329 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 MSANTD1Q6ZTZ1 278 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 IKBIPQ70UQ0 350 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 C19orf47Q8N9M1 422 aaKnown RBP22.76■■□□□ 1.23
SNX3-203ENST00000368979 LRRC58Q96CX6 371 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 LOXL4Q96JB6 756 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 TEFMQ96QE5 360 aaKnown RBP22.76■■□□□ 1.23
SNX3-203ENST00000368979 OR52E6Q96RD3 313 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 HOPXQ9BPY8 73 aaPredicted RBP22.76■■□□□ 1.23
SNX3-203ENST00000368979 C17orf62Q9BQA9 187 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 EPB41L1Q9H4G0 881 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 SLC7A8Q9UHI5 535 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 PADI4Q9UM07 663 aa22.76■■□□□ 1.23
SNX3-203ENST00000368979 ADAMTS9Q9P2N4 1935 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 A0A0A6YYD5 115 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 SLC35G6P0C7Q6 338 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 COX7A2P14406 83 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 ALDH4A1P30038 563 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 PLA2G16P53816 162 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 MTTPP55157 894 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 RGS1Q08116 209 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 FRMPD2BQ6IN97 320 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 TMEM132CQ8N3T6 1108 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 SRFBP1Q8NEF9 429 aaKnown RBP22.75■■□□□ 1.23
SNX3-203ENST00000368979 OR7A2PQ8NGA2 310 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 OR8J2Q8NGG1 315 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 GTF2H4Q92759 462 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 CDRT15Q96T59 188 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 MAP3K3Q99759 626 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 SLC39A3Q9BRY0 314 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 IL1RL2Q9HB29 575 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 ATP6V1HQ9UI12 483 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 MDC1Q14676 2089 aaKnown RBP22.75■■□□□ 1.23
SNX3-203ENST00000368979 DNAH14Q0VDD8 3507 aa22.75■■□□□ 1.23
SNX3-203ENST00000368979 P2RX6O15547 441 aa22.74■■□□□ 1.23
SNX3-203ENST00000368979 ERI3O43414 337 aaKnown RBP22.74■■□□□ 1.23
SNX3-203ENST00000368979 SYPP08247 313 aa22.74■■□□□ 1.23
SNX3-203ENST00000368979 PIM1P11309 404 aaPredicted RBP22.74■■□□□ 1.23
SNX3-203ENST00000368979 MYF5P13349 255 aa22.74■■□□□ 1.23
SNX3-203ENST00000368979 SSR2P43308 183 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms