RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 UPK3BL2E5RIL1 263 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 BHLHE40O14503 412 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 COCHO43405 550 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 OIP5O43482 229 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CNTN5O94779 1100 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CH25HO95992 272 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 FABP3P05413 133 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 OR3A3P47888 321 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 OR3A2P47893 321 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CCNHP51946 323 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 SELENOVP59797 346 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 MRPS10P82664 201 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 GALK2Q01415 458 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CAMKVQ8NCB2 501 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 HLA-CQ95604 372 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 CCDC106Q9BWC9 280 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 NSUN3Q9H649 340 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 PDE7BQ9NP56 450 aa6.86□□□□□ -1.31
SPTA1-201ENST00000368147 C14orf166Q9Y224 244 aaKnown RBP6.86□□□□□ -1.31
SPTA1-201ENST00000368147 EDN3P14138 238 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 KIR3DL1P43629 444 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ALDH3B2P48448 385 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 VEGFCP49767 419 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 RBM39Q14498 530 aaKnown RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 REP15Q6BDI9 236 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 FBXO46Q6PJ61 603 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 SPATA19Q7Z5L4 167 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 TRAPPC6BQ86SZ2 158 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 INPP4AQ96PE3 977 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 MCOLN1Q9GZU1 580 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 TRNAU1APQ9NX07 287 aaKnown RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 PPP4R1LQ9P1A2 415 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 WRAP73Q9P2S5 460 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 WASF3Q9UPY6 502 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 I3L521 148 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 DUX1O43812 170 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 NOBOXO60393 691 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 AHSA1O95433 338 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 F10P00742 488 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 MYOGP15173 224 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 TARDBPQ13148 414 aaKnown RBP eCLIP6.85□□□□□ -1.312e-8■■■□□ 17.3
SPTA1-201ENST00000368147 STK11Q15831 433 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 TMEM225Q6GV28 225 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 S100A7AQ86SG5 101 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 DHDDSQ86SQ9 333 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 FOXRED2Q8IWF2 684 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 GSTCDQ8NEC7 633 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 CHAC2Q8WUX2 184 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 TCEAL4Q96EI5 215 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 HNRNPABQ99729 332 aaKnown RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 MINDY3Q9H8M7 445 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 SAGE1Q9NXZ1 904 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 APOBEC3BQ9UH17 382 aaKnown RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ASB3Q9Y575 518 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 NME7Q9Y5B8 376 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 AP1M2Q9Y6Q5 423 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ISPDA4D126 451 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 EME2A4GXA9 379 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 RNF225M0QZC1 329 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ATP6V1G2O95670 118 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 SNAI1O95863 264 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 CDH1P12830 882 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ETV3P41162 512 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 CTBP2P56545 445 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 BNIP3Q12983 259 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 PDSS1Q5T2R2 415 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 GPRC6AQ5T6X5 926 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 PHC2Q8IXK0 858 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 OR10A6Q8NH74 314 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 SLC22A18Q96BI1 424 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 TREX2Q9BQ50 279 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 SLC25A51Q9H1U9 297 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 SAR1AQ9NR31 198 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 NUDT4Q9NZJ9 180 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 C20orf202A1L168 122 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 SOD2P04179 222 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ALADP13716 330 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 AIF1P55008 147 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 GRK1Q15835 563 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 BATFQ16520 125 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 PLD5Q8N7P1 536 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ZDHHC1Q8WTX9 485 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 MSLNLQ96KJ4 702 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 SLC35A5Q9BS91 424 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ERVK-5Q9HDB9 667 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 AK6Q9Y3D8 172 aaKnown RBP6.85□□□□□ -1.31
SPTA1-201ENST00000368147 HS3ST4Q9Y661 456 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 FER1L6Q2WGJ9 1857 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 E7EQ34 232 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ATP6V1G2-DDX39BF2Z307 99 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 PIP5K1BO14986 540 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 OAZ2O95190 189 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 BCHEP06276 602 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ARSAP15289 507 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 CCNFP41002 786 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 RAB5CP51148 216 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 ADGRE1Q14246 886 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 DEFB110Q30KQ9 67 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 KLHL26Q53HC5 615 aa6.85□□□□□ -1.31
SPTA1-201ENST00000368147 MRPL41Q8IXM3 137 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms