RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 MAGEA11P43364 429 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ABHD18Q0P651 414 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 RALGPS1Q5JS13 557 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 OTOP3Q7RTS5 596 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 NSMAFQ92636 917 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ZNF599Q96NL3 588 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ACTL8Q9H568 366 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 BNIP3Q12983 259 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 NCCRP1Q6ZVX7 275 aaPredicted RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 Q8N402 240 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ACDQ96AP0 544 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ERLEC1Q96DZ1 483 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 FAM163AQ96GL9 167 aaPredicted RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 BARD1Q99728 777 aaKnown RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 COL20A1Q9P218 1284 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 LRCH4O75427 683 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 H2AFB2P0C5Z0 115 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 FAM198BQ6UWH4 519 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 SAMD12Q8N8I0 201 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ACBD6Q9BR61 282 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 KCNS2Q9ULS6 477 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 TCRBV5S4A2TA0A5A2 114 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ZNF84P51523 738 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 LASP1Q14847 261 aaKnown RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 GPR139Q6DWJ6 353 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ALPK1Q96QP1 1244 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 KLRF1Q9NZS2 232 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 VEGFCP49767 419 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 HADHBP55084 474 aaKnown RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 ACSBG2Q5FVE4 666 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CXCL17Q6UXB2 119 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 SKA3Q8IX90 412 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 PGAP3Q96FM1 320 aaPredicted RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 DPYSL5Q9BPU6 564 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 MROQ9BYG7 248 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ZBTB26Q9HCK0 441 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 SPATA31A1Q5TZJ5 1347 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 TRBC2A0A5B9 178 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CILPO75339 1184 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 THBS2P35442 1172 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CTC1Q2NKJ3 1217 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 PIGGQ5H8A4 983 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CCDC71LQ8N9Z2 235 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 MYOCQ99972 504 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CCM2Q9BSQ5 444 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 TLE6Q9H808 572 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 MGAT4CQ9UBM8 478 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 TLX2O43763 284 aaPredicted RBP12.06□□□□□ -0.48
TPR-201ENST00000367478 GHRHRQ02643 423 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ZNF616Q08AN1 781 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CAPSQ13938 189 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ZNF280BQ86YH2 543 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 PDSS2Q86YH6 399 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CASTOR1Q8WTX7 329 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ZUFSPQ96AP4 578 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 CCDC106Q9BWC9 280 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 ATG5Q9H1Y0 275 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 GPRC5BQ9NZH0 403 aa12.06□□□□□ -0.48
TPR-201ENST00000367478 KLK3P07288 261 aaPredicted RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 AMY2BP19961 511 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 NMBRP28336 390 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 PRAMEF14Q5SWL7 426 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 PRAMEF13Q5VWM6 474 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 FANK1Q8TC84 345 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 ZNF334Q9HCZ1 680 aaPredicted RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 FAM86C1Q9NVL1 165 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 TMEM45AQ9NWC5 275 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 KLHL13Q9P2N7 655 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 UTS2RQ9UKP6 389 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 DDTLA6NHG4 134 aaPredicted RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 RRAS2P62070 204 aaPredicted RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 CDK6Q00534 326 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 SLC36A3Q495N2 470 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 REEP3Q6NUK4 255 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 BRAT1Q6PJG6 821 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 PROKR1Q8TCW9 393 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 DNMT3AQ9Y6K1 912 aaPredicted RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 AOC1P19801 751 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 BDH1Q02338 343 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 USP50Q70EL3 339 aaPredicted RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 ALDH16A1Q8IZ83 802 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 TM9SF4Q92544 642 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 PKP4Q99569 1192 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 G6PC3Q9BUM1 346 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 MRIQ9BWK5 157 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 GXYLT2A0PJZ3 443 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 TRAPPC13A5PLN9 417 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 BCAS1O75363 584 aaPredicted RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 IL33O95760 270 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 PSPHP78330 225 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 OC90Q02509 493 aaPredicted RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 P2RX7Q99572 595 aaKnown RBP12.05□□□□□ -0.48
TPR-201ENST00000367478 MRI1Q9BV20 369 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 NME7Q9Y5B8 376 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 DNM1LO00429 736 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 LYPLA2O95372 231 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 CDK3Q00526 305 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 KRBOX4Q5JUW0 171 aa12.05□□□□□ -0.48
TPR-201ENST00000367478 SLC24A5Q71RS6 500 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms