RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 FXYD6Q9H0Q3 95 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 C3orf14Q9HBI5 128 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 GPRC5BQ9NZH0 403 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 COL11A2P13942 1736 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 A0A1B0GVG6 124 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 TARM1B6A8C7 271 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 DISC1C4P0D8 188 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 NOBOXO60393 691 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 PRKCGP05129 697 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 NAT1P18440 290 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CAPN3P20807 821 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 GSTM2P28161 218 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 RFX3P48380 749 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 KEAP1Q14145 624 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 RAET1GQ6H3X3 334 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 PSAPL1Q6NUJ1 521 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 SPRED1Q7Z699 444 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 TMPRSS11BQ86T26 416 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 OOSP2Q86WS3 158 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CARM1Q86X55 608 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CHERPQ8IWX8 916 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 FAM20CQ8IXL6 584 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 KLHDC8BQ8IXV7 354 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 GPR65Q8IYL9 337 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 PXYLP1Q8TE99 480 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CXorf40BQ96DE9 158 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 TSNAXQ99598 290 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 GKN1Q9NS71 199 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CALML5Q9NZT1 146 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ARID1BQ8NFD5 2236 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ANKRD31Q8N7Z5 1873 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 PCM1Q15154 2024 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 OR10H3O60404 316 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 OR6A2O95222 327 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 DNTTP04053 509 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ZNF26P17031 533 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ENGP17813 658 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 PVALBP20472 110 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 RBM34P42696 430 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 DGKQP52824 942 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 NKX2-5P52952 324 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CEP76Q8TAP6 659 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 YIPF2Q9BWQ6 316 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ABCD2Q9UBJ2 740 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 TMEM5Q9Y2B1 443 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CEPT1Q9Y6K0 416 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 SORBS2O94875 1100 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ALPIP09923 528 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CCND3P30281 292 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 FMO3P31513 532 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ERVPABLB-1P60509 514 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CXCR4P61073 352 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 RAB39AQ14964 217 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 KIAA1614Q5VZ46 1190 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 C17orf64Q86WR6 236 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 OR7G1Q8NGA0 311 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 USP7Q93009 1102 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 OTUB2Q96DC9 234 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 MUS81Q96NY9 551 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 NSUN5Q96P11 429 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CWH43Q9H720 699 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 METTL8Q9H825 291 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 AGPAT4Q9NRZ5 378 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ERVW-1Q9UQF0 538 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 LTBP1Q14766 1721 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 TTC24A2A3L6 582 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 OR2B3O76000 313 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 CCNB2O95067 398 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 GADD45GO95257 159 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 SNAP29O95721 258 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 IFNW1P05000 195 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ITPKAP23677 461 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 IDNKQ5T6J7 187 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 LRRN1Q6UXK5 716 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 RPTNQ6XPR3 784 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 MBOAT1Q6ZNC8 495 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 LINGO2Q7L985 606 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 INO80EQ8NBZ0 244 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ASB15Q8WXK1 588 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 GPR78Q96P69 363 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 RTP3Q9BQQ7 232 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 TAS2R3Q9NYW6 316 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 FZD4Q9ULV1 537 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 LRATO95237 230 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 JUPP14923 745 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 EPORP19235 508 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 KELP23276 732 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 KDELR2P33947 212 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ZNF81P51508 661 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 MANFP55145 182 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 PTPRCAPQ14761 206 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ZNF789Q5FWF6 425 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 FBXO48Q5FWF7 155 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 DCST1Q5T197 706 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 MPP7Q5T2T1 576 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ATXN7L2Q5T6C5 722 aaPredicted RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 RPS27LQ71UM5 84 aaKnown RBP5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 RGL4Q8IZJ4 473 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 ACVR1CQ8NER5 493 aa5.19□□□□□ -1.58
CDC42BPA-204ENST00000366767 TTLQ8NG68 377 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms