RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 HNMTP50135 292 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 NAGLUP54802 743 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 GYS2P54840 703 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 DNAJB13P59910 316 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 ELOAQ14241 798 aaKnown RBP7.8□□□□□ -1.16
MRPL55-211ENST00000366738 CHI3L2Q15782 390 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 CDKL4Q5MAI5 379 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 HHATQ5VTY9 493 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SP5Q6BEB4 398 aaPredicted RBP7.8□□□□□ -1.16
MRPL55-211ENST00000366738 CAPN13Q6MZZ7 669 aaPredicted RBP7.8□□□□□ -1.16
MRPL55-211ENST00000366738 KLHL35Q6PF15 583 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 FAM198BQ6UWH4 519 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 FRMD7Q6ZUT3 714 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 LRRC70Q7Z2Q7 622 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SYVN1Q86TM6 617 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 TMEM126BQ8IUX1 230 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SLC22A9Q8IVM8 553 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 DSELQ8IZU8 1212 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 RAB42Q8N4Z0 105 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 TEX9Q8N6V9 391 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 CCNYL1Q8N7R7 359 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 ENDOVQ8N8Q3 282 aaKnown RBP7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SNX31Q8N9S9 440 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 OR52B6Q8NGF0 335 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 OR2A1Q8NGT9 310 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 OR6Y1Q8NGX8 325 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 ATL1Q8WXF7 558 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SMPDL3AQ92484 453 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 MR1Q95460 341 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 CDK15Q96Q40 435 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 CD180Q99467 661 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 MIPEPQ99797 713 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 C1QTNF3Q9BXJ4 246 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 GPR87Q9BY21 358 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SHCBP1LQ9BZQ2 653 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 C20orf27Q9GZN8 174 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 KLHL25Q9H0H3 589 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SPNS1Q9H2V7 528 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 ZNF395Q9H8N7 513 aaPredicted RBP7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SYNPO2LQ9H987 977 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 TNFRSF12AQ9NP84 129 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SLC6A20Q9NP91 592 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 SEMA4BQ9NPR2 832 aaPredicted RBP7.8□□□□□ -1.16
MRPL55-211ENST00000366738 DNAJC11Q9NVH1 559 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 OPTCQ9UBM4 332 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 ITGB1BP2Q9UKP3 347 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 TMCO1Q9UM00 188 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 FARSAQ9Y285 508 aaKnown RBP7.8□□□□□ -1.16
MRPL55-211ENST00000366738 NTNG1Q9Y2I2 539 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 KLHL20Q9Y2M5 609 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 PCDHGB7Q9Y5F8 929 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 CNTRLQ7Z7A1 2325 aa7.8□□□□□ -1.16
MRPL55-211ENST00000366738 ZGRF1Q86YA3 2104 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 C2orf74A8MZ97 194 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 H3BMH7 237 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 K7EPI3 171 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 MASP2O00187 686 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 UBFD1O14562 309 aaKnown RBP7.79□□□□□ -1.16
MRPL55-211ENST00000366738 OR7A17O14581 309 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 BIRC5O15392 142 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 LRRTM2O43300 516 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 ITM2AO43736 263 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 KDM1AO60341 852 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 ZG16O60844 167 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 TRIM13O60858 407 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 DIAPH2O60879 1101 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 SUPT7LO94864 414 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 CDH1P12830 882 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 NPPBP16860 134 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 CD22P20273 847 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 IMPDH1P20839 514 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 ARL4DP49703 201 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 FOXL2P58012 376 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 RPS15P62841 145 aaKnown RBP7.79□□□□□ -1.16
MRPL55-211ENST00000366738 MEF2AQ02078 507 aaPredicted RBP7.79□□□□□ -1.16
MRPL55-211ENST00000366738 GUCY1A3Q02108 690 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 CDC16Q13042 620 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 TRAF3Q13114 568 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 GTF2H2Q13888 395 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 ZRSR2Q15696 482 aaKnown RBP7.79□□□□□ -1.16
MRPL55-211ENST00000366738 ZIC1Q15915 447 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 PDK4Q16654 411 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 CATSPEREQ5SY80 951 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 THEMIS2Q5TEJ8 643 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 ICE2Q659A1 982 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 ZNF385CQ66K41 422 aaPredicted RBP7.79□□□□□ -1.16
MRPL55-211ENST00000366738 TTC19Q6DKK2 380 aaPredicted RBP7.79□□□□□ -1.16
MRPL55-211ENST00000366738 GTF2H2CQ6P1K8 395 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 SPESP1Q6UW49 350 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 LCTLQ6UWM7 567 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 TMPRSS11BQ86T26 416 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 BPHLQ86WA6 291 aaPredicted RBP7.79□□□□□ -1.16
MRPL55-211ENST00000366738 NUDCD3Q8IVD9 361 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 OR2L3Q8NG85 312 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 FAM76AQ8TAV0 307 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 TRPC4APQ8TEL6 797 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 NEIL2Q969S2 332 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 LURAP1Q96LR2 239 aa7.79□□□□□ -1.16
MRPL55-211ENST00000366738 LRFN5Q96NI6 719 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms