RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ZFYVE1Q9HBF4 777 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 TNPO3Q9Y5L0 923 aaKnown RBP18.94■□□□□ 0.62
TRIM58-201ENST00000366481 A3GALT2U3KPV4 340 aa18.94■□□□□ 0.62
TRIM58-201ENST00000366481 PIKFYVEQ9Y2I7 2098 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 TSPAN19P0C672 248 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 BCKDHAP12694 445 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 RFX2P48378 723 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 RAB25P57735 213 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 CSNK2BP67870 215 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 CACNG1Q06432 222 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 ABHD18Q0P651 414 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 TXNDC8Q6A555 127 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 PLET1Q6UQ28 207 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 DIRAS2Q96HU8 199 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 P2RY12Q9H244 342 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 GPRC5BQ9NZH0 403 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 LHX3Q9UBR4 397 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 DNAH14Q0VDD8 3507 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 TSPAN9O75954 239 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 CD72P21854 359 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 ITPKAP23677 461 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 RPS14P62263 151 aaKnown RBP18.93■□□□□ 0.62
TRIM58-201ENST00000366481 SREBF2Q12772 1141 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 YIF1BQ5BJH7 314 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 ZSWIM9Q86XI8 627 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 YIPF7Q8N8F6 280 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 ARL14EPQ8N8R7 260 aaPredicted RBP18.93■□□□□ 0.62
TRIM58-201ENST00000366481 ARHGAP33O14559 1287 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 TNFRSF1BP20333 461 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 FBXO43Q4G163 708 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 SPOUT1Q5T280 376 aaKnown RBP18.93■□□□□ 0.62
TRIM58-201ENST00000366481 OR8H1Q8NGG4 311 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 MTERF3Q96E29 417 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 MYO19Q96H55 970 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 C1QTNF3Q9BXJ4 246 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 FAM126AQ9BYI3 521 aaPredicted RBP18.93■□□□□ 0.62
TRIM58-201ENST00000366481 ATG10Q9H0Y0 220 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 GPBP1L1Q9HC44 474 aaPredicted RBP18.93■□□□□ 0.62
TRIM58-201ENST00000366481 STARD7Q9NQZ5 370 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 TMEM39AQ9NV64 488 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 MALT1Q9UDY8 824 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 VPS9D1Q9Y2B5 631 aa18.93■□□□□ 0.62
TRIM58-201ENST00000366481 XIRP2A4UGR9 3374 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 COL4A4P53420 1690 aaPredicted RBP18.92■□□□□ 0.62
TRIM58-201ENST00000366481 PLK4O00444 970 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 CA12O43570 354 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 C9P02748 559 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 CKMT1AP12532 417 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 ZNF7P17097 686 aaPredicted RBP18.92■□□□□ 0.62
TRIM58-201ENST00000366481 ENGP17813 658 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 WEE1P30291 646 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 KDELR2P33947 212 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 EIF3MQ7L2H7 374 aaKnown RBP18.92■□□□□ 0.62
TRIM58-201ENST00000366481 KRT73Q86Y46 540 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 CHAC2Q8WUX2 184 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 ARL15Q9NXU5 204 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 TRPM5Q9NZQ8 1165 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 AP3M1Q9Y2T2 418 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 A0A0X1KG70 313 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 TNFRSF11BO00300 401 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 GAPDHSO14556 408 aaPredicted RBP18.92■□□□□ 0.62
TRIM58-201ENST00000366481 OR2B3O76000 313 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 PSKH1P11801 424 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 GJA1P17302 382 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 INPP1P49441 399 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 RNF180Q86T96 592 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 GTPBP3Q969Y2 492 aaKnown RBP18.92■□□□□ 0.62
TRIM58-201ENST00000366481 CPPED1Q9BRF8 314 aaPredicted RBP18.92■□□□□ 0.62
TRIM58-201ENST00000366481 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.92■□□□□ 0.62
TRIM58-201ENST00000366481 ZNF556Q9HAH1 456 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 TMEM161AQ9NX61 479 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 CLCA3PQ9Y6N3 262 aa18.92■□□□□ 0.62
TRIM58-201ENST00000366481 FABP12A6NFH5 140 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 TMEM189-UBE2V1I3L0A0 370 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 CLIC1O00299 241 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 SLC28A1O00337 649 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 OPN1SWP03999 348 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 HNF1BP35680 557 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 STK19P49842 368 aaPredicted RBP18.91■□□□□ 0.62
TRIM58-201ENST00000366481 MRPL28Q13084 256 aaKnown RBP18.91■□□□□ 0.62
TRIM58-201ENST00000366481 NFATC2Q13469 925 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 KIAA0040Q15053 153 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 KLHL17Q6TDP4 642 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 PCSK9Q8NBP7 692 aaKnown RBP18.91■□□□□ 0.62
TRIM58-201ENST00000366481 FOXJ1Q92949 421 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 APOLD1Q96LR9 279 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 CCL27Q9Y4X3 112 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 PCDHGB2Q9Y5G2 931 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 A0A0G2JMP0 313 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 BPIP17213 487 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 HMGCLP35914 325 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 SOX3P41225 446 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 MRPL19P49406 292 aaKnown RBP18.91■□□□□ 0.62
TRIM58-201ENST00000366481 SP3Q02447 781 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 NLRP8Q86W28 1048 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 SELENOMQ8WWX9 145 aa18.91■□□□□ 0.62
TRIM58-201ENST00000366481 MRPS14O60783 128 aaKnown RBP18.91■□□□□ 0.62
TRIM58-201ENST00000366481 RPS19P39019 145 aaKnown RBP18.91■□□□□ 0.62
TRIM58-201ENST00000366481 BOP1Q14137 746 aaKnown RBP18.91■□□□□ 0.62
TRIM58-201ENST00000366481 CYP27C1Q4G0S4 372 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms