RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 PLA2G4EQ3MJ16 856 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 DNAL1Q4LDG9 190 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 AGTRAPQ6RW13 159 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 RINLQ6ZS11 566 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 TIPARPQ7Z3E1 657 aaKnown RBP10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 C17orf82Q86X59 251 aaPredicted RBP10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 FAM129CQ86XR2 697 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 KIF2BQ8N4N8 673 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 L3MBTL4Q8NA19 623 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 OR4D9Q8NGE8 314 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 OR9A1PQ8NGU1 263 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 TUBGCP3Q96CW5 907 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 CDK15Q96Q40 435 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 TEFMQ96QE5 360 aaKnown RBP10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 TMEM168Q9H0V1 697 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 FGF22Q9HCT0 170 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 OCIAD1Q9NX40 245 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 SLC23A2Q9UGH3 650 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 ZNHIT2Q9UHR6 403 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 BTRCQ9Y297 605 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 MAP4K5Q9Y4K4 846 aa10.78□□□□□ -0.68
CSNK1E-202ENST00000366216 KCNE1BA0A087WTH5 132 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 ATP6AP2A0A1C7CYW4 349 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 SERTM1A2A2V5 107 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 SLC28A1O00337 649 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 GSC2O15499 205 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 ATP6AP2O75787 350 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 SLC16A8O95907 504 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 LDLRP01130 860 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 FUCA1P04066 466 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 RPN2P04844 631 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 EZRP15311 586 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 F8A1P23610 371 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 CD1CP29017 333 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 IMPA1P29218 277 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 HSD17B2P37059 387 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 ARL1P40616 181 aaPredicted RBP10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 ZNF33BQ06732 778 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 NR1D2Q14995 579 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 MAPRE2Q15555 327 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 EIF2S3LQ2VIR3 472 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 KRTAP21-3Q3LHN1 58 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 CCSMST1Q4G0I0 132 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 PYCR3Q53H96 274 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 NKAIN2Q5VXU1 208 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 LIPJQ5W064 366 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 Q6ZSR9 355 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 TRIM46Q7Z4K8 759 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 THOC6Q86W42 341 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 NRROSQ86YC3 692 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 GALNT13Q8IUC8 556 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 DCUN1D3Q8IWE4 304 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 BMPERQ8N8U9 685 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 SNX31Q8N9S9 440 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 PRR7Q8TB68 274 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 PATE1Q8WXA2 126 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 RAD51AP1Q96B01 352 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 RNF31Q96EP0 1072 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 ATG10Q9H0Y0 220 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 MMADHCQ9H3L0 296 aaPredicted RBP10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 ACTR8Q9H981 624 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 SLC40A1Q9NP59 571 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 TMEM45AQ9NWC5 275 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 GPRC5BQ9NZH0 403 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 G3BP2Q9UN86 482 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 SLC22A14Q9Y267 594 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 RNF11Q9Y3C5 154 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 PRKAB1Q9Y478 270 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 PTGDR2Q9Y5Y4 395 aa10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 MRPS18BQ9Y676 258 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-202ENST00000366216 NIPBLQ6KC79 2804 aaeCLIP10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 NPIPB8E9PQR5 432 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 PSMD12O00232 456 aaPredicted RBP10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 IFRD1O00458 451 aaPredicted RBP10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 MANBAO00462 879 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 TNFRSF10CO14798 259 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 RGS14O43566 566 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 RASSF9O75901 435 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 KRT6AP02538 564 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 KRT6BP04259 564 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 KRT16P08779 473 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 FURINP09958 794 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 ALDOCP09972 364 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 IDO1P14902 403 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 CPOXP36551 454 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 CASP2P42575 452 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 GPR3P46089 330 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 CPA2P48052 419 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 KRT6CP48668 564 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 HTR6P50406 440 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 CLCNKAP51800 687 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 STX1BP61266 288 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 ERVK-8P63133 956 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 MRPL49Q13405 166 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 NAE1Q13564 534 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 CYLC2Q14093 348 aaPredicted RBP10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 E2F2Q14209 437 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 GRB7Q14451 532 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 ARHGAP19Q14CB8 494 aa10.76□□□□□ -0.69
CSNK1E-202ENST00000366216 ATP6AP1LQ52LC2 224 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms