RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 EXO1Q9UQ84 846 aaKnown RBP21.72■■□□□ 1.07
LDB1-201ENST00000361198 STON1Q9Y6Q2 735 aa21.72■■□□□ 1.07
LDB1-201ENST00000361198 SLC1A7O00341 560 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 CCNDBP1O95273 360 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 TGFB1P01137 390 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 GBAP04062 536 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 CCDC159P0C7I6 412 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 ITIH1P19827 911 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 AGXTP21549 392 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 MAPK10P53779 464 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 RAD23AP54725 363 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 CDK3Q00526 305 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 VAC14Q08AM6 782 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 WSCD2Q2TBF2 565 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 PAGE2BQ5JRK9 111 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 AGBL4Q5VU57 503 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 GALNT18Q6P9A2 607 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 NXPE4Q6UWF7 544 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 UNC5DQ6UXZ4 953 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.71■■□□□ 1.07
LDB1-201ENST00000361198 ARMCX6Q7L4S7 300 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 PDZD3Q86UT5 571 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 YAF2Q8IY57 180 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 ZNF740Q8NDX6 193 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 TRUB1Q8WWH5 349 aaKnown RBP21.71■■□□□ 1.07
LDB1-201ENST00000361198 ZNF566Q969W8 418 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 NRTNQ99748 197 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 EHD1Q9H4M9 534 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 DMRT3Q9NQL9 472 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 FOXE1O00358 373 aaPredicted RBP21.71■■□□□ 1.07
LDB1-201ENST00000361198 SAP18O00422 153 aaKnown RBP21.71■■□□□ 1.07
LDB1-201ENST00000361198 CBFA2T3O75081 653 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 E2F6O75461 281 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 CLPXO76031 633 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 PCDH8O95206 1070 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 VMACQ2NL98 169 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 ZZZ3Q8IYH5 903 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 DPH2Q9BQC3 489 aaPredicted RBP21.71■■□□□ 1.07
LDB1-201ENST00000361198 OR51B5Q9H339 312 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 SERGEFQ9UGK8 458 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 PCDHB11Q9Y5F2 797 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 PCDHGB1Q9Y5G3 927 aa21.71■■□□□ 1.07
LDB1-201ENST00000361198 M0QX08 132 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 LINC01565O15544 149 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 ITGAMP11215 1152 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 PCMT1P22061 227 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 CPZQ66K79 652 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 SHQ1Q6PI26 577 aaKnown RBP21.7■■□□□ 1.06
LDB1-201ENST00000361198 SYCE2Q6PIF2 218 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 COMMD6Q7Z4G1 85 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 CAMKMTQ7Z624 323 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 PTOV1Q86YD1 416 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 RAD51AP1Q96B01 352 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 COQ8BQ96D53 544 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 FUNDC2Q9BWH2 189 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 TPT1P8Q9HAU6 139 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 SH3BP4Q9P0V3 963 aa21.7■■□□□ 1.06
LDB1-201ENST00000361198 ZBTB11O95625 1053 aaPredicted RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 CST6Q15828 149 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 HIST2H2ACQ16777 129 aaPredicted RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 HIST2H2AA3Q6FI13 130 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 SLC16A12Q6ZSM3 486 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 GALNT10Q86SR1 603 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 TFGQ92734 400 aaPredicted RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 NODALQ96S42 347 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 MYADMQ96S97 322 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 TRIT1Q9H3H1 467 aaKnown RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 BTNL2Q9UIR0 455 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 TDRKHQ9Y2W6 561 aaKnown RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 CFAP20Q9Y6A4 193 aaKnown RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 PI15O43692 258 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 ZNF682O95780 498 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 HPCAL1P37235 193 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 SPIDRQ14159 915 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 ZNF385BQ569K4 471 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 PRAMEF14Q5SWL7 426 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 PRAMEF13Q5VWM6 474 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 LRRTM4Q86VH4 590 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.69■■□□□ 1.06
LDB1-201ENST00000361198 COX4I2Q96KJ9 171 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 ACAT2Q9BWD1 397 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 GABARAPL1Q9H0R8 117 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 RAD21L1Q9H4I0 556 aa21.69■■□□□ 1.06
LDB1-201ENST00000361198 MBNL1Q9NR56 388 aaKnown RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 PAK1IP1Q9NWT1 392 aaPredicted RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 SAMD4AQ9UPU9 718 aaKnown RBP21.69■■□□□ 1.06
LDB1-201ENST00000361198 RFXAPO00287 272 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 HNRNPCP07910 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
LDB1-201ENST00000361198 TFPTP0C1Z6 253 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 EIF2DP41214 584 aaKnown RBP21.68■■□□□ 1.06
LDB1-201ENST00000361198 ZNF763Q0D2J5 394 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 RPA4Q13156 261 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 CDK5R2Q13319 367 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 IER5LQ5T953 404 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 PGBD3Q8N328 593 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 VPS37AQ8NEZ2 397 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 SETD7Q8WTS6 366 aaKnown RBP21.68■■□□□ 1.06
LDB1-201ENST00000361198 FGF14Q92915 247 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 MCOLN1Q9GZU1 580 aa21.68■■□□□ 1.06
LDB1-201ENST00000361198 RSPH9Q9H1X1 276 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms