RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 HTR3EA5X5Y0 456 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 F5H0A9 414 aaPredicted RBP14.09□□□□□ -0.15
NUP98-203ENST00000359171 OAS1P00973 400 aaKnown RBP14.09□□□□□ -0.15
NUP98-203ENST00000359171 IGFBP4P22692 258 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 CD40LGP29965 261 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 C10orf62Q5T681 223 aaPredicted RBP14.09□□□□□ -0.15
NUP98-203ENST00000359171 ARSKQ6UWY0 536 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 CARM1Q86X55 608 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 ZSWIM9Q86XI8 627 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 CCDC106Q9BWC9 280 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 MRM3Q9HC36 420 aaKnown RBP14.09□□□□□ -0.15
NUP98-203ENST00000359171 ERVK-11Q9UQG0 969 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 A0A1B0GVI7 797 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 HERV-K104P61576 105 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 CDK10Q15131 360 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 MSS51Q4VC12 460 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 DCDC5Q6ZRR9 648 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 HFE2Q6ZVN8 426 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 GNPDA2Q8TDQ7 276 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 OVCA2Q8WZ82 227 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 SIGLEC10Q96LC7 697 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 SLC38A3Q99624 504 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 RIPK3Q9Y572 518 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 NR2E3Q9Y5X4 410 aa14.09□□□□□ -0.15
NUP98-203ENST00000359171 HSPA12AO43301 675 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 OAZ2O95190 189 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 CLIC3O95833 236 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 SLURP2P0DP57 97 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 HOXD8P13378 290 aaPredicted RBP14.08□□□□□ -0.15
NUP98-203ENST00000359171 GDI2P50395 445 aaKnown RBP14.08□□□□□ -0.15
NUP98-203ENST00000359171 BLKP51451 505 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 GABARAPL2P60520 117 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 FKBP1BP68106 108 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 ANKRD13BQ86YJ7 626 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 NPAS4Q8IUM7 802 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 BEX2Q9BXY8 128 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 POTEKPQ9BYX7 375 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 KCNH6Q9H252 994 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 BEX1Q9HBH7 125 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 PAQR5Q9NXK6 330 aaPredicted RBP14.08□□□□□ -0.15
NUP98-203ENST00000359171 GSKIPQ9P0R6 139 aa14.08□□□□□ -0.15
NUP98-203ENST00000359171 AGAP5A6NIR3 686 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 ADAMTS3O15072 1205 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 CCL16O15467 120 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 TLL1O43897 1013 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 BCKDHAP12694 445 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 PTPN2P17706 415 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 CD47Q08722 323 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 ZNF678Q5SXM1 525 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 CCBE1Q6UXH8 406 aaPredicted RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 VITQ6UXI7 678 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 PIGVQ9NUD9 493 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 CNOT11Q9UKZ1 510 aaKnown RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 ERCC6L2Q5T890 1561 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 NPIPA5E9PKD4 350 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 PORP16435 677 aaPredicted RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 PLEKHG7Q6ZR37 379 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 FAM86B1Q8N7N1 296 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 NEIL3Q8TAT5 605 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 NPIPA1Q9UND3 350 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 PPRC1Q5VV67 1664 aaKnown RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 A8MV72 311 aaPredicted RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 RBBP9O75884 186 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 FGF3P11487 239 aaPredicted RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 ELK4P28324 431 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 CSKP41240 450 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 MECP2P51608 486 aaKnown RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 IRF5Q13568 498 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 GINS1Q14691 196 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 KCT2Q8NC54 265 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 JSRP1Q96MG2 331 aaPredicted RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 CCSER2Q9H7U1 834 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 SDHAF3Q9NRP4 125 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 PCDHAC2Q9Y5I4 1007 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 SNAP29O95721 258 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 ITGA5P08648 1049 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 HTR1EP28566 365 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 TREML2Q5T2D2 321 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 MOB2Q70IA6 237 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 TREML1Q86YW5 311 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 MFSD2AQ8NA29 543 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 THEM6Q8WUY1 208 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 LGALS12Q96DT0 336 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 RIOK2Q9BVS4 552 aaKnown RBP14.08□□□□□ -0.16
NUP98-203ENST00000359171 PCDHB3Q9Y5E6 796 aa14.08□□□□□ -0.16
NUP98-203ENST00000359171 AGTR1P30556 359 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 FXYD6P3P58550 94 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 SLC25A11Q02978 314 aaKnown RBP14.07□□□□□ -0.16
NUP98-203ENST00000359171 FADDQ13158 208 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 LSAMPQ13449 338 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 MYLK3Q32MK0 819 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 TXNRD3NBQ6F5E7 133 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 FBXL22Q6P050 247 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 TMEM41AQ96HV5 264 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 IL12RB2Q99665 862 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 CCDC32Q9BV29 185 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 HERC2P3Q9BVR0 1158 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 WDR26Q9H7D7 661 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 SLC2A6Q9UGQ3 507 aa14.07□□□□□ -0.16
NUP98-203ENST00000359171 CLCA3PQ9Y6N3 262 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms