RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PIK3CBP42338 1070 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 HADHBP55084 474 aaKnown RBP17.81■□□□□ 0.44
SHANK1-202ENST00000359082 HERV-K104P61576 105 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 TEAD2Q15562 447 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 PRRT3Q5FWE3 981 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 CELF5Q8N6W0 485 aaKnown RBP17.81■□□□□ 0.44
SHANK1-202ENST00000359082 GNPDA2Q8TDQ7 276 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 HSPBAP1Q96EW2 488 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 TSSK6Q9BXA6 273 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 ERVK-18Q9QC07 812 aa17.81■□□□□ 0.44
SHANK1-202ENST00000359082 SLC18A2Q05940 514 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 GRM2Q14416 872 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 SLC35F1Q5T1Q4 408 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 OR56A1Q8NGH5 318 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 SHKBP1Q8TBC3 707 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 CD300LFQ8TDQ1 290 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 SETD7Q8WTS6 366 aaKnown RBP17.8■□□□□ 0.44
SHANK1-202ENST00000359082 CASTOR1Q8WTX7 329 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 NTAN1Q96AB6 310 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 DNAJA3Q96EY1 480 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 NPLQ9BXD5 320 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-202ENST00000359082 WRAP73Q9P2S5 460 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-202ENST00000359082 WNT6Q9Y6F9 365 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 TEX13CA0A0J9YWL9 993 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 GLTPD2A6NH11 291 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 GLOD5A6NK44 160 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 H3BSA7 217 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 TTYH3Q9C0H2 523 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 FZD8Q9H461 694 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 SLC7A8Q9UHI5 535 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 UPK3BL1B0FP48 263 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 UPK3BL2E5RIL1 263 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 CREG1O75629 220 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 TYRP1P17643 537 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 CD40LGP29965 261 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 SEC23BQ15437 767 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 UGT8Q16880 541 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 TMEM126BQ8IUX1 230 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 RBCK1Q9BYM8 510 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 ASB3Q9Y575 518 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 A0A1B0GVC2 190 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 CCRL2O00421 344 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 XPNPEP2O43895 674 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 GNAO1P09471 354 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 TUBG1P23258 451 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 SH3YL1Q96HL8 342 aaPredicted RBP17.8■□□□□ 0.44
SHANK1-202ENST00000359082 FBXL20Q96IG2 436 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 CMKLR1Q99788 373 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 TMED5Q9Y3A6 229 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 RHDQ02161 417 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 ZBED5Q49AG3 693 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 SYNPOQ8N3V7 929 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 NINJ1Q92982 152 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 TMEM41AQ96HV5 264 aa17.8■□□□□ 0.44
SHANK1-202ENST00000359082 DLX3O60479 287 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 AHSGP02765 367 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 PEPDP12955 493 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 GLP1RP43220 463 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 SNTA1Q13424 505 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 EFR3AQ14156 821 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 KCNJ11Q14654 390 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 OR2AP1Q8NGE2 309 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 SLC29A3Q9BZD2 475 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 MKLN1Q9UL63 735 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 VSTM5A8MXK1 200 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 INAVAQ3KP66 663 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 EOGTQ5NDL2 527 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 ANO7Q6IWH7 933 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 GPAT4Q86UL3 456 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 OR5J2Q8NH18 312 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 BIRC7Q96CA5 298 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 S100A16Q96FQ6 103 aaKnown RBP17.79■□□□□ 0.44
SHANK1-202ENST00000359082 BTBD1Q9H0C5 482 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 ZNF395Q9H8N7 513 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-202ENST00000359082 SH2B3Q9UQQ2 575 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 FAM159BA6NKW6 160 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 M0QX08 132 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 PEX12O00623 359 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 HCRTO43612 131 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 BCKDHAP12694 445 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 MEF2AQ02078 507 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-202ENST00000359082 CDK10Q15131 360 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 NKAPLQ5M9Q1 402 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 ARSKQ6UWY0 536 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 C12orf43Q96C57 262 aaKnown RBP17.79■□□□□ 0.44
SHANK1-202ENST00000359082 GPR88Q9GZN0 384 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 MTMR10Q9NXD2 777 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 KCNS2Q9ULS6 477 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 TRAV6A0A075B6T7 132 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 KDELR3O43731 214 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 C8BP07358 591 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 EDNRBP24530 442 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 TXNRD3NBQ6F5E7 133 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 CRTAC1Q9NQ79 661 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 USF2Q15853 346 aaPredicted RBP17.79■□□□□ 0.44
SHANK1-202ENST00000359082 XPNPEP1Q9NQW7 623 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 BCL9LQ86UU0 1499 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 INPPL1O15357 1258 aa17.79■□□□□ 0.44
SHANK1-202ENST00000359082 KLK3P07288 261 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms