RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TSPAN6O43657 245 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 CRYBA1P05813 215 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 CBSLP0DN79 551 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 ADRA1DP25100 572 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 CBSP35520 551 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 CDK7P50613 346 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 SCARB2Q14108 478 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 C9orf135Q5VTT2 229 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 FAM205BPQ63HN1 556 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 IL20RBQ6UXL0 311 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 BBS12Q6ZW61 710 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 BPHLQ86WA6 291 aaPredicted RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 NPRL2Q8WTW4 380 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 ESAMQ96AP7 390 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 KLHDC7BQ96G42 594 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 ZNF395Q9H8N7 513 aaPredicted RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 ABRACLQ9P1F3 81 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 RAB26Q9ULW5 256 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 PSMD10O75832 226 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 GBAP04062 536 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 BCHEP06276 602 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 HLA-EP13747 358 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 AMY2BP19961 511 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 SOX2P48431 317 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 GNB1P62873 340 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 EIF5AP63241 154 aaKnown RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 NOMO3P69849 1222 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 KLF1Q13351 362 aaPredicted RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 SERINC3Q13530 473 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 RCAN2Q14206 197 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 NOMO1Q15155 1222 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 USP51Q70EK9 711 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 GRASPQ7Z6J2 395 aaPredicted RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 ACTRT1Q8TDG2 376 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 MRPL38Q96DV4 380 aaKnown RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 RETREG1Q9H6L5 497 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 PNPOQ9NVS9 261 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 RLIMQ9NVW2 624 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 TRNAU1APQ9NX07 287 aaKnown RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 ATXN10Q9UBB4 475 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 TESQ9UGI8 421 aaKnown RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 KAT6AQ92794 2004 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 ASTN1O14525 1302 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 FTCDNL1E5RQL4 147 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 HCRTR2O43614 444 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 RAB36O95755 333 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 CHRNA1P02708 482 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 GHRHRQ02643 423 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 WSCD2Q2TBF2 565 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 SLC35F1Q5T1Q4 408 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 LIPMQ5VYY2 423 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 ASB15Q8WXK1 588 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 SLC35C1Q96A29 364 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 RSPRY1Q96DX4 576 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 WWTR1Q9GZV5 400 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 SLC2A8Q9NY64 477 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 IFNA4P05014 189 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 E2F1Q01094 437 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 TLE1Q04724 770 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 KRBOX4Q5JUW0 171 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 FUT10Q6P4F1 479 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 FIGNL1Q6PIW4 674 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 FAM160A2Q8N612 972 aaPredicted RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 STT3BQ8TCJ2 826 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 METTL2AQ96IZ6 378 aaKnown RBP9.47□□□□□ -0.89
CHD3-202ENST00000358181 TPSD1Q9BZJ3 242 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 EBF3Q9H4W6 596 aa9.47□□□□□ -0.89
CHD3-202ENST00000358181 TOR1BO14657 336 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 IFNA10P01566 189 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 DHRS4L1P0CG22 281 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 XKP51811 444 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 OR4D2P58180 307 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 TXNDC8Q6A555 127 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 C6orf120Q7Z4R8 191 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 CUZD1Q86UP6 607 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 TWIST2Q8WVJ9 160 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 DAZAP1Q96EP5 407 aaKnown RBP9.46□□□□□ -0.89
CHD3-202ENST00000358181 CDK15Q96Q40 435 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 ASB7Q9H672 318 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 TIMMDC1Q9NPL8 285 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 C1orf109Q9NX04 203 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 TAS2R7Q9NYW3 318 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 MAGEB17A8MXT2 336 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 FOXO6A8MYZ6 492 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 NRP1O14786 923 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 FLRT2O43155 660 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 ANGPTL7O43827 346 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 ONECUT3O60422 494 aaPredicted RBP9.46□□□□□ -0.89
CHD3-202ENST00000358181 COQ9O75208 318 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 CD83Q01151 205 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 PTPRCAPQ14761 206 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 HYAL4Q2M3T9 481 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 PDE12Q6L8Q7 609 aaKnown RBP9.46□□□□□ -0.89
CHD3-202ENST00000358181 MAP4K3Q8IVH8 894 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 BBS1Q8NFJ9 593 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 PITX2Q99697 317 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 NXF5Q9H1B4 397 aaKnown RBP9.46□□□□□ -0.89
CHD3-202ENST00000358181 Q9N2J8 555 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 BOLA2-SMG1P6H3BVE0 249 aa9.46□□□□□ -0.89
CHD3-202ENST00000358181 SLC31A2O15432 143 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms