RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 MOGQ16653 247 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 HNRNPA1L2Q32P51 320 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 CPZQ66K79 652 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 GTF2IRD2BQ6EKJ0 949 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 GTF2IRD2Q86UP8 949 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ZDHHC21Q8IVQ6 265 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 OR8J2Q8NGG1 315 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 RPLP0P6Q8NHW5 317 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 CDC26Q8NHZ8 85 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 TBC1D15Q8TC07 691 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 SNX19Q92543 992 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 C11orf24Q96F05 449 aaPredicted RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 BCL7BQ9BQE9 202 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 OR2AG1Q9H205 316 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 PALMDQ9NP74 551 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 TBCCD1Q9NVR7 557 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 GALNT8Q9NY28 637 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 TMEFF2Q9UIK5 374 aaPredicted RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 SNX5Q9Y5X3 404 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 A0A1W2PPW3 197 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 TBC1D3BA6NDS4 549 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 MAGEB17A8MXT2 336 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 CLIC1O00299 241 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 SCAMP2O15127 329 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 NOBOXO60393 691 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 EPN2O95208 641 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ETHE1O95571 254 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ENGP17813 658 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 GPX2P18283 190 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ITIH1P19827 911 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 GPR1P46091 355 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ASMTP46597 345 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 STT3AP46977 705 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 CCR3P51677 355 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ISL1P61371 349 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 RAE1P78406 368 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 E2F2Q14209 437 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 SF1Q15637 639 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 FBXO43Q4G163 708 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 RAET1GQ6H3X3 334 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 KLHL35Q6PF15 583 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 SLCO4C1Q6ZQN7 724 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 CHST15Q7LFX5 561 aaPredicted RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ZZZ3Q8IYH5 903 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 CFAP206Q8IYR0 622 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 CHPFQ8IZ52 775 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 SYNPOQ8N3V7 929 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 C1orf52Q8N6N3 182 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 OR7G3Q8NG95 312 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 ZNF480Q8WV37 535 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 MUL1Q969V5 352 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 TRIT1Q9H3H1 467 aaKnown RBP13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 IL1RAPQ9NPH3 570 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 AASDHPPTQ9NRN7 309 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 TBC1D23Q9NUY8 699 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 GULP1Q9UBP9 304 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 PSME2Q9UL46 239 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 HCN2Q9UL51 889 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 PCDHGB1Q9Y5G3 927 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 KCNE2Q9Y6J6 123 aa13.73□□□□□ -0.21
NIPAL3-203ENST00000358028 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 K7ESM1 405 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 M0QX08 132 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 PLK4O00444 970 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 B4GAT1O43505 415 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 LZTS3O60299 673 aaPredicted RBP13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 DPM1O60762 260 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 CPSF4O95639 269 aaKnown RBP13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 C6P13671 934 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 ADRB3P13945 408 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 IL7RP16871 459 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 MATN1P21941 496 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 PPIBP23284 216 aaKnown RBP13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 PIGAP37287 484 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 TBPL1P62380 186 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 LRRC74AQ0VAA2 488 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 GTF2H3Q13889 308 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 KEAP1Q14145 624 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 VMACQ2NL98 169 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 TMEM52BQ4KMG9 183 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 SPIN4Q56A73 249 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 C2orf27AQ580R0 203 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 FGD3Q5JSP0 725 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 OR2T5Q6IEZ7 315 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 ADNP2Q6IQ32 1131 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 CAPN13Q6MZZ7 669 aaPredicted RBP13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 ANKRD26P1Q6NSI1 321 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 MED27Q6P2C8 311 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 XKR5Q6UX68 686 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 GPR155Q7Z3F1 870 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 TMEM179BQ7Z7N9 219 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 TMPRSS11BQ86T26 416 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 TRAPPC5Q8IUR0 188 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 C1orf210Q8IVY1 113 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 MAML2Q8IZL2 1156 aaPredicted RBP13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 CLECL1Q8IZS7 167 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 OR2T29Q8NH02 315 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 HUS1BQ8NHY5 278 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 CHTF18Q8WVB6 975 aa13.72□□□□□ -0.21
NIPAL3-203ENST00000358028 ATOH1Q92858 354 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms