RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 ZNF585AQ6P3V2 769 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 PAMR1Q6UXH9 720 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 KIAA0408Q6ZU52 694 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 MDGA2Q7Z553 956 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 LRRC56Q8IYG6 542 aaPredicted RBP14.8□□□□□ -0.04
IFT20-202ENST00000357896 WFDC11Q8NEX6 87 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 ALG3Q92685 438 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 FAM136AQ96C01 138 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 PTCHD1Q96NR3 888 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 TCF12Q99081 682 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 SMR3AQ99954 134 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 PCBD2Q9H0N5 130 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 TREX1Q9NSU2 369 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 CRIM1Q9NZV1 1036 aa14.8□□□□□ -0.04
IFT20-202ENST00000357896 PHF3Q92576 2039 aaKnown RBP14.8□□□□□ -0.04
IFT20-202ENST00000357896 A0A0G2JNJ9 132 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 FEZF1A0PJY2 475 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 SAGE2PA6NJ88 616 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 A6NNC1 897 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 E5RI56 91 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 ZBTB14O43829 449 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 GRK3P35626 688 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 CLCN2P51788 898 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 PPIAP62937 165 aaKnown RBP14.79□□□□□ -0.04
IFT20-202ENST00000357896 PLGLB1Q02325 96 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 KEAP1Q14145 624 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 CAPN13Q6MZZ7 669 aaPredicted RBP14.79□□□□□ -0.04
IFT20-202ENST00000357896 SLC22A16Q86VW1 577 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 SLC26A11Q86WA9 606 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 VSTM4Q8IW00 320 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 REXO1L1PQ8IX06 675 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 OR5T3Q8NGG3 340 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 OR5M9Q8NGP3 310 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 SPATA3Q8NHX4 192 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 LPGAT1Q92604 370 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 ARSGQ96EG1 525 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 LRRC46Q96FV0 321 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 SMC6Q96SB8 1091 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 MDFIQ99750 246 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 REPIN1Q9BWE0 567 aaKnown RBP14.79□□□□□ -0.04
IFT20-202ENST00000357896 ZDHHC11Q9H8X9 412 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 CCDC177Q9NQR7 707 aaPredicted RBP14.79□□□□□ -0.04
IFT20-202ENST00000357896 Q9UFV3 132 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 TFR2Q9UP52 801 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 JMJD1CQ15652 2540 aa14.79□□□□□ -0.04
IFT20-202ENST00000357896 SYCE3A1L190 88 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 ZNF860A6NHJ4 632 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 SYT5O00445 386 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 B4GALT2O60909 372 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 WDR1O75083 606 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 ITGA10O75578 1167 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 HEXAP06865 529 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 APRTP07741 180 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 SKIV2L2P42285 1042 aaKnown RBP14.78□□□□□ -0.04
IFT20-202ENST00000357896 NAP1L1P55209 391 aaKnown RBP14.78□□□□□ -0.04
IFT20-202ENST00000357896 KLF1Q13351 362 aaPredicted RBP14.78□□□□□ -0.04
IFT20-202ENST00000357896 KCNJ11Q14654 390 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 RPS6KA1Q15418 735 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 TTLL9Q3SXZ7 439 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 TMEM198Q66K66 360 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 QSOX2Q6ZRP7 698 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 WDR53Q7Z5U6 358 aaPredicted RBP14.78□□□□□ -0.04
IFT20-202ENST00000357896 LIX1LQ8IVB5 337 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 ARMC2Q8NEN0 867 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 NFAM1Q8NET5 270 aaPredicted RBP14.78□□□□□ -0.04
IFT20-202ENST00000357896 FAM222BQ8WU58 562 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 NUDT8Q8WV74 236 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 ASB11Q8WXH4 323 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 CCDC138Q96M89 665 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 IL22Q9GZX6 179 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 RAB6BQ9NRW1 208 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 B4GALT7Q9UBV7 327 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 ERVK-11Q9UQG0 969 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 CRYL1Q9Y2S2 319 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 FAM215AQ9Y5M1 114 aa14.78□□□□□ -0.04
IFT20-202ENST00000357896 HRNRQ86YZ3 2850 aaPredicted RBP14.77□□□□□ -0.04
IFT20-202ENST00000357896 AKR1B15C9JRZ8 316 aaPredicted RBP14.77□□□□□ -0.05
IFT20-202ENST00000357896 AP3B1O00203 1094 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 CHST10O43529 356 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 GALR3O60755 368 aaPredicted RBP14.77□□□□□ -0.05
IFT20-202ENST00000357896 ATE1O95260 518 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 HOXC12P31275 282 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 UQCRC1P31930 480 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 SSR4P51571 173 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 TYSND1Q2T9J0 566 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 FLYWCH1Q4VC44 716 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 NDUFAF5Q5TEU4 345 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 GPALPP1Q8IXQ4 340 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 AFAP1L2Q8N4X5 818 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 PSD4Q8NDX1 1056 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 B3GNT7Q8NFL0 401 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 CLK4Q9HAZ1 481 aaKnown RBP14.77□□□□□ -0.05
IFT20-202ENST00000357896 NEUROD4Q9HD90 331 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 KCMF1Q9P0J7 381 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 KLHL42Q9P2K6 505 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 GALPQ9UBC7 116 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 FBXW2Q9UKT8 454 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 DRG1Q9Y295 367 aaKnown RBP14.77□□□□□ -0.05
IFT20-202ENST00000357896 VPS9D1Q9Y2B5 631 aa14.77□□□□□ -0.05
IFT20-202ENST00000357896 YARS2Q9Y2Z4 477 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms