RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CSF2P04141 144 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 NKX6-1P78426 367 aaPredicted RBP12.46□□□□□ -0.41
SMC4-202ENST00000357388 SLC8B1Q6J4K2 584 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 TMEM68Q96MH6 324 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 PPIL3Q9H2H8 161 aaKnown RBP12.46□□□□□ -0.41
SMC4-202ENST00000357388 ABCA6Q8N139 1617 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 TNFRSF10BO14763 440 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 PROM1O43490 865 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 C4BPAP04003 597 aaKnown RBP12.46□□□□□ -0.41
SMC4-202ENST00000357388 C8AP07357 584 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 DLSTP36957 453 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 CTSOP43234 321 aaPredicted RBP12.46□□□□□ -0.41
SMC4-202ENST00000357388 PPP5CP53041 499 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 RHBDL3P58872 404 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 KRBOX4Q5JUW0 171 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 CLEC12AQ5QGZ9 265 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 TPGS2Q68CL5 300 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 C6orf89Q6UWU4 347 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 HFE2Q6ZVN8 426 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 IRF2BP1Q8IU81 584 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 BEST3Q8N1M1 668 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 C2orf73Q8N5S3 287 aaPredicted RBP12.46□□□□□ -0.41
SMC4-202ENST00000357388 FAM86B1Q8N7N1 296 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 OR56A1Q8NGH5 318 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 OR4C15Q8NGM1 316 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 CIDECQ96AQ7 238 aaPredicted RBP12.46□□□□□ -0.41
SMC4-202ENST00000357388 LIN37Q96GY3 246 aaPredicted RBP12.46□□□□□ -0.41
SMC4-202ENST00000357388 CNTNAP3BQ96NU0 1288 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 FCRL5Q96RD9 977 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 ZCCHC3Q9NUD5 404 aaKnown RBP12.46□□□□□ -0.41
SMC4-202ENST00000357388 ACSL5Q9ULC5 683 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 FZD10Q9ULW2 581 aa12.46□□□□□ -0.41
SMC4-202ENST00000357388 NEMP2A6NFY4 417 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 DENRO43583 198 aaKnown RBP12.46□□□□□ -0.42
SMC4-202ENST00000357388 CERS1P27544 350 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 RAB41Q5JT25 222 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 RPL13AP3Q6NVV1 102 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 TMEM220Q6QAJ8 160 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 NAT8LQ8N9F0 302 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 FBXL20Q96IG2 436 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 ACSS2Q9NR19 701 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 TMEM45AQ9NWC5 275 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 GNG8Q9UK08 70 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 BCL9O00512 1426 aa12.46□□□□□ -0.42
SMC4-202ENST00000357388 TLX2O43763 284 aaPredicted RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 SPATA31C1P0DKV0 1188 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 DHPSP49366 369 aaPredicted RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 HLCSP50747 726 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 DGKEP52429 567 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 GPAT4Q86UL3 456 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 MALSU1Q96EH3 234 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 ARHGAP9Q9BRR9 750 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 TPT1P8Q9HAU6 139 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 MRPS30Q9NP92 439 aaKnown RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 OSER1Q9NX31 292 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 FNIP2Q9P278 1114 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 ZFP37Q9Y6Q3 630 aaPredicted RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 A8MV72 311 aaPredicted RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 H3BUI4 141 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 CAPN5O15484 640 aaPredicted RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 FFAR2O15552 330 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 MRPS14O60783 128 aaKnown RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 LATS1O95835 1130 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 TGM6O95932 706 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 HNRNPFP52597 415 aaKnown RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 NUDT6P53370 316 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 CAV3P56539 151 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 CD47Q08722 323 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 AKR1C8PQ5T2L2 129 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 SLC22A10Q63ZE4 541 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 ZNF529Q6P280 563 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 MTFR2Q6P444 385 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 ZSWIM9Q86XI8 627 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 SAMD12Q8N8I0 201 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 ZSCAN4Q8NAM6 433 aaPredicted RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 ACDQ96AP0 544 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 LIN28AQ9H9Z2 209 aaKnown RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 LMTK2Q8IWU2 1503 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 A8MT66 165 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 ITGA5P08648 1049 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 RPL35P42766 123 aaKnown RBP12.45□□□□□ -0.42
SMC4-202ENST00000357388 CCDC58Q4VC31 144 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 TMEM236Q5W0B7 351 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 ABHD15Q6UXT9 468 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 RGMAQ96B86 450 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 SULT4A1Q9BR01 284 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 TTYH2Q9BSA4 534 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 TTYH3Q9C0H2 523 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 OR51I1Q9H343 314 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 SDHAF3Q9NRP4 125 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 SOBPA7XYQ1 873 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 ECI2O75521 394 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 SOX9P48436 509 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 FPGSQ05932 587 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 POU4F2Q12837 409 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 DEDD2Q8WXF8 326 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 OVCA2Q8WZ82 227 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 SMPDL3BQ92485 455 aa12.45□□□□□ -0.42
SMC4-202ENST00000357388 C7orf34Q96L11 122 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms