RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 C8AP07357 584 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CR2P20023 1033 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 S100A1P23297 94 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 RPS3P23396 243 aaKnown RBP eCLIP6.58□□□□□ -1.363e-15■□□□□ 9.2
RTN4-203ENST00000357376 SSR2P43308 183 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 DSTNP60981 165 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 MC1RQ01726 317 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 SPIN4Q56A73 249 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CLEC12AQ5QGZ9 265 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 ATAD3BQ5T9A4 648 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 DHRS4L2Q6PKH6 230 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 USP51Q70EK9 711 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 C17orf64Q86WR6 236 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 VRK3Q8IV63 474 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 NLGN4XQ8N0W4 816 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CADM3Q8N126 398 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 TCEANCQ8N8B7 351 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 ING5Q8WYH8 240 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 DPF3Q92784 378 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 DNASE1L2Q92874 299 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 FATE1Q969F0 183 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 UBE2E3Q969T4 207 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 PDLIM5Q96HC4 596 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 SLC30A2Q9BRI3 323 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 SLC12A9Q9BXP2 914 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 PPT2Q9UMR5 302 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 SLC9A8Q9Y2E8 581 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 HCN4Q9Y3Q4 1203 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 UNCXA6NJT0 531 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 SCAMP2O15127 329 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 TLX2O43763 284 aaPredicted RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 GABARAPO95166 117 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 OXSR1O95747 527 aaPredicted RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 PAICSP22234 425 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 HOXD12P35452 270 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CSRP3P50461 194 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 XKP51811 444 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 RAB25P57735 213 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 ZNF763Q0D2J5 394 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 KEAP1Q14145 624 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 RGNQ15493 299 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 C5orf22Q49AR2 442 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CRTC2Q53ET0 693 aaPredicted RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 DESI1Q6ICB0 168 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 PLET1Q6UQ28 207 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 TRIM48Q8IWZ4 208 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 ZNF683Q8IZ20 524 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CACTIN-AS1Q8N1I8 211 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 OXR1Q8N573 874 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CIDECQ96AQ7 238 aaPredicted RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 RNFT2Q96EX2 444 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 DEFB118Q96PH6 123 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 TEFMQ96QE5 360 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 CITED4Q96RK1 184 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 ASPNQ9BXN1 380 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 P2RY12Q9H244 342 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 TBC1D17Q9HA65 648 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 RPRD1BQ9NQG5 326 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 TMEM39AQ9NV64 488 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 TMEM45AQ9NWC5 275 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 CLEC4AQ9UMR7 237 aa6.58□□□□□ -1.36
RTN4-203ENST00000357376 MRPS7Q9Y2R9 242 aaKnown RBP6.58□□□□□ -1.36
RTN4-203ENST00000357376 FABP12A6NFH5 140 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 CLCA1A8K7I4 914 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 TMEM189-UBE2V1I3L0A0 370 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 J3KTA2 159 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 RTCAO00442 366 aaKnown RBP6.57□□□□□ -1.36
RTN4-203ENST00000357376 AQP9O43315 295 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 KLK8O60259 260 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 PCDHGA12O60330 932 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 PLOD3O60568 738 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 CXCL14O95715 111 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 INHAP05111 366 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 ALPPL2P10696 532 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 ITGAMP11215 1152 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 TIE1P35590 1138 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 PHC1P78364 1004 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 CD83Q01151 205 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 SLC14A1Q13336 389 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 RNASE12Q5GAN4 147 aaKnown RBP6.57□□□□□ -1.36
RTN4-203ENST00000357376 LIPKQ5VXJ0 399 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 CYP4Z2PQ8N1L4 340 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 Q8N9G6 341 aaPredicted RBP6.57□□□□□ -1.36
RTN4-203ENST00000357376 TEX47Q8TBZ9 253 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 PIK3R3Q92569 461 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 IGSF21Q96ID5 467 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 IL17FQ96PD4 163 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 C1QTNF3Q9BXJ4 246 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 RNF208Q9H0X6 261 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 RNF167Q9H6Y7 350 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 C5AR2Q9P296 337 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 B3GNT3Q9Y2A9 372 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 GABRR3A8MPY1 467 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 HNRNPCL2B2RXH8 293 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 CCRL2O00421 344 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 ADAM23O75077 832 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 ADAMTS4O75173 837 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 LEFTY1O75610 366 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 UPK1BO75841 260 aa6.57□□□□□ -1.36
RTN4-203ENST00000357376 CDRT1O95170 752 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms