RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 RELAQ04206 551 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 NR0B2Q15466 257 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 ADPRMQ3LIE5 342 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 CYB5D1Q6P9G0 228 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 FAM92BQ6ZTR7 304 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 RNF44Q7L0R7 432 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 SCUBE1Q8IWY4 988 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 ULK2Q8IYT8 1036 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 MINDY1Q8N5J2 469 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 Q8N9G6 341 aaPredicted RBP17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 TRPV3Q8NET8 790 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 NCSTNQ92542 709 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 CCDC74AQ96AQ1 378 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 ROPN1LQ96C74 230 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 TMEM74Q96NL1 305 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 MAP3K3Q99759 626 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 RAB33BQ9H082 229 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 WDR41Q9HAD4 459 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 EPHA6Q9UF33 1036 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 RAB23Q9ULC3 237 aa17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.32■□□□□ 0.36
SMARCD3-202ENST00000356800 LOC105369274A0A096LPK9 316 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 LOC102723532A0A0G2JNH3 316 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 A0A0J9YVX5 310 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 CCDC154A6NI56 674 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 SLC9B1P1A6NJY1 282 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 RTCAO00442 366 aaKnown RBP17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 KHNYNO15037 678 aaKnown RBP17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 ANGPT2O15123 496 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 HCRTR1O43613 425 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 PCDH7O60245 1069 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 MGRN1O60291 552 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 GBAP04062 536 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 ANXA4P09525 319 aaPredicted RBP17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 BSGP35613 385 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 CLDN8P56748 225 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 FRMPD2BQ6IN97 320 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 GUSBP11Q6P575 273 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 PGM2L1Q6PCE3 622 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 RETREG3Q86VR2 466 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 OR4N4Q8N0Y3 316 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 TM4SF19Q96DZ7 209 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 TGM7Q96PF1 710 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 ZBTB18Q99592 522 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 ZFYVE21Q9BQ24 234 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 DPY30Q9C005 99 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 FAM60AQ9NP50 221 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 C1GALT1Q9NS00 363 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 MAP10Q9P2G4 905 aa17.31■□□□□ 0.36
SMARCD3-202ENST00000356800 ASPDHA6ND91 283 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 EEDO75530 441 aaKnown RBP17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 MYO1DO94832 1006 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 KLK1P06870 262 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 CD1CP29017 333 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 CSF2RBP32927 897 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 PERM1Q5SV97 790 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 LAIR1Q6GTX8 287 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 C8orf82Q6P1X6 216 aaPredicted RBP17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 DGLUCYQ7Z3D6 616 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 SPRED1Q7Z699 444 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 RIMKLAQ8IXN7 391 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 C19orf47Q8N9M1 422 aaKnown RBP17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 SLC13A3Q8WWT9 602 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 VPS33AQ96AX1 596 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 MS4A6EQ96DS6 147 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 SLC6A16Q9GZN6 736 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 REXO4Q9GZR2 422 aaKnown RBP17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 CLMPQ9H6B4 373 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 BTBD3Q9Y2F9 522 aa17.3■□□□□ 0.36
SMARCD3-202ENST00000356800 LNP1A1A4G5 178 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 P2RX6O15547 441 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 TPP2P29144 1249 aaPredicted RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 PPM1FP49593 454 aaPredicted RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 SNRPNP63162 240 aaKnown RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 RIPK1Q13546 671 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 AMZ1Q400G9 498 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 TMEM35AQ53FP2 167 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 TOR1AIP1Q5JTV8 583 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 ASPGQ86U10 573 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 C10orf67Q8IYJ2 551 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 SUMF1Q8NBK3 374 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 NT5CQ8TCD5 201 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 RGMAQ96B86 450 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 THAP11Q96EK4 314 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 AHCYL2Q96HN2 611 aaKnown RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 EPB41L1Q9H4G0 881 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 AHSPQ9NZD4 102 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 MCM8Q9UJA3 840 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 LEF1Q9UJU2 399 aaPredicted RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 CROCCQ5TZA2 2017 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 SCN3AQ9NY46 2000 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 IGHV5-51A0A0C4DH38 117 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 A0A0G2JN53 185 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 CPED1A4D0V7 1026 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 EME2A4GXA9 379 aaPredicted RBP17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 TLCD2A6NGC4 264 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 H0YGG7 62 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 LRATO95237 230 aa17.29■□□□□ 0.36
SMARCD3-202ENST00000356800 IL6P05231 212 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms