RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 MARCH7Q9H992 704 aa5.37□□□□□ -1.55
PTPRD-202ENST00000356435 FBRSL1Q9HCM7 1045 aaKnown RBP5.37□□□□□ -1.55
PTPRD-202ENST00000356435 LAMP5Q9UJQ1 280 aa5.37□□□□□ -1.55
PTPRD-202ENST00000356435 ACSL5Q9ULC5 683 aa5.37□□□□□ -1.55
PTPRD-202ENST00000356435 DUOX1Q9NRD9 1551 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MANBAO00462 879 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF217O75362 1048 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ARL6IP5O75915 188 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 RAB36O95755 333 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 DCDC1P59894 354 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MERTKQ12866 999 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 HERC3Q15034 1050 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SLC36A3Q495N2 470 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 EIF5AL1Q6IS14 154 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CGB2Q6NT52 195 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FRMD7Q6ZUT3 714 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TOMM5Q8N4H5 51 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FRS2Q8WU20 508 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 KCTD7Q96MP8 289 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ZFP3Q96NJ6 502 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 RAD9AQ99638 391 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PRTFDC1Q9NRG1 225 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 E7ENX8 843 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FAM189A1O60320 539 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 LRCH4O75427 683 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CCNKO75909 580 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PRKCGP05129 697 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 EFNA1P20827 205 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 S100A2P29034 98 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 GRIA2P42262 883 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FSTL1Q12841 308 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF630Q2M218 657 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM151BQ8IW70 566 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 HORMAD2Q8N7B1 307 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 RAB7BQ96AH8 199 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PCDHB18PQ96TA0 734 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 DMAC2Q9NW81 257 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PARPBPQ9NWS1 579 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 GIN1Q9NXP7 522 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 KCNIP1Q9NZI2 227 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TMEM98Q9Y2Y6 226 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 A0A0G2JN53 185 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 A0A1B0GVT2 93 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 B8ZZF3 427 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 HLA-DQB2P05538 268 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CDH1P12830 882 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 NELFEP18615 380 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 IVDP26440 423 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 RPL10P27635 214 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MXD1Q05195 221 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CCL14Q16627 93 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF550Q7Z398 422 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 GRASPQ7Z6J2 395 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TRAPPC6BQ86SZ2 158 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CPT1BQ92523 772 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FCRL5Q96RD9 977 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MAPKAP1Q9BPZ7 522 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 POLDIP3Q9BY77 421 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 EHD1Q9H4M9 534 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 EBF3Q9H4W6 596 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PREBQ9HCU5 417 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MS4A12Q9NXJ0 267 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 PDE10AQ9Y233 779 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TMA7Q9Y2S6 64 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 KCNIP3Q9Y2W7 256 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ATRNL1Q5VV63 1379 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TRBC2A0A5B9 178 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SOWAHBA6NEL2 793 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 GPR89AB7ZAQ6 455 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TMX2-CTNND1H3BSU7 103 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 P04436 131 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 KLK1P06870 262 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 GPR89BP0CG08 455 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 HSD3B1P14060 373 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CCND3P30281 292 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 OR4D2P58180 307 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 UBE2NP61088 152 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ST3GAL3Q11203 375 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 DCAF12L1Q5VU92 463 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FRG2Q64ET8 278 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ERN2Q76MJ5 926 aaKnown RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 LYSMD3Q7Z3D4 306 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 KBTBD6Q86V97 674 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 CBR4Q8N4T8 237 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 IL17RCQ8NAC3 791 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 HPS1Q92902 700 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SMARCD2Q92925 531 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 BMFQ96LC9 184 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 NEDD4LQ96PU5 975 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FRG2BQ96QU4 278 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 MVB12BQ9H7P6 319 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SCML2Q9UQR0 700 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ZNF99A8MXY4 864 aaPredicted RBP5.36□□□□□ -1.55
PTPRD-202ENST00000356435 BLOC1S5-TXNDC5H3BN57 136 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 TGFB1I1O43294 461 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 ECI2O75521 394 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 SNAPC5O75971 98 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 FAM163BP0C2L3 166 aa5.36□□□□□ -1.55
PTPRD-202ENST00000356435 GM2AP17900 193 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms