RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 CLDN8P56748 225 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 SNAP47Q5SQN1 464 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 CCNYL2Q5T2Q4 361 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 ADAMTSL4Q6UY14 1074 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 ZNF793Q6ZN11 406 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 OR4N4Q8N0Y3 316 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 FAM46DQ8NEK8 389 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 ROPN1LQ96C74 230 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 TEFMQ96QE5 360 aaKnown RBP13.28□□□□□ -0.28
LSS-201ENST00000356396 PRPF18Q99633 342 aaKnown RBP13.28□□□□□ -0.28
LSS-201ENST00000356396 SLC6A20Q9NP91 592 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 GPATCH2Q9NW75 528 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 ABCD2Q9UBJ2 740 aa13.28□□□□□ -0.28
LSS-201ENST00000356396 OR6C74A6NCV1 312 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 ERI3O43414 337 aaKnown RBP13.27□□□□□ -0.28
LSS-201ENST00000356396 MITFO75030 526 aaPredicted RBP13.27□□□□□ -0.28
LSS-201ENST00000356396 VPS4BO75351 444 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 FKBP9O95302 570 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 IGHV4-34P06331 123 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 GLULP15104 373 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 CERS1P27544 350 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 PTPN6P29350 595 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 ADSLP30566 484 aaPredicted RBP13.27□□□□□ -0.28
LSS-201ENST00000356396 ENPP2Q13822 863 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 LPAL2Q16609 132 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 CPTPQ5TA50 214 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 FKBP9P1Q75LS8 142 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 STK32CQ86UX6 486 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 CMTM7Q96FZ5 175 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 GABRG3Q99928 467 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 WFDC6Q9BQY6 131 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 EHD1Q9H4M9 534 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 NCKAP1Q9Y2A7 1128 aa13.27□□□□□ -0.28
LSS-201ENST00000356396 AHCTF1Q8WYP5 2266 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 IDSP22304 550 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 TPP2P29144 1249 aaPredicted RBP13.27□□□□□ -0.29
LSS-201ENST00000356396 CSNK1EP49674 416 aaKnown RBP13.27□□□□□ -0.29
LSS-201ENST00000356396 VAC14Q08AM6 782 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 LRRC74AQ0VAA2 488 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 SP140Q13342 867 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 GPR18Q14330 331 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 ARMC3Q5W041 872 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 FRMPD2BQ6IN97 320 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 Q6ZPB1 254 aaPredicted RBP13.27□□□□□ -0.29
LSS-201ENST00000356396 TAF8Q7Z7C8 310 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 OR5T3Q8NGG3 340 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 HOPXQ9BPY8 73 aaPredicted RBP13.27□□□□□ -0.29
LSS-201ENST00000356396 YIPF3Q9GZM5 350 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 LHX9Q9NQ69 397 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 MIEF1Q9NQG6 463 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 SPATA6Q9NWH7 488 aaPredicted RBP13.27□□□□□ -0.29
LSS-201ENST00000356396 ABCG2Q9UNQ0 655 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 GPR34Q9UPC5 381 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 CUL9Q8IWT3 2517 aa13.27□□□□□ -0.29
LSS-201ENST00000356396 J3KTA2 159 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 M0R129 80 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 CXCR6O00574 342 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 MAN1A2O60476 641 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 SCN2BO60939 215 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 POU2F1P14859 743 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 ZNF26P17031 533 aaPredicted RBP13.26□□□□□ -0.29
LSS-201ENST00000356396 PSMA4P25789 261 aaKnown RBP13.26□□□□□ -0.29
LSS-201ENST00000356396 RFX3P48380 749 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 LSSP48449 732 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 MASP1P48740 699 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 ATP4BP51164 291 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 NKAIN2Q5VXU1 208 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 SPESP1Q6UW49 350 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 EFL1Q7Z2Z2 1120 aaKnown RBP13.26□□□□□ -0.29
LSS-201ENST00000356396 RNF130Q86XS8 419 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 TMEM151BQ8IW70 566 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 RIMKLAQ8IXN7 391 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 OR2I1PQ8NGU4 316 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 MAGEC3Q8TD91 643 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 C16orf78Q8WTQ4 265 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 SGPP1Q9BX95 441 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 TPT1P8Q9HAU6 139 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 TCRBV3S1A0A5B6 114 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 STAMBPO95630 424 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 THEGLP0DJG4 465 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 IL1RNP18510 177 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 KELP23276 732 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 EPHA2P29317 976 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 CSNK1G2P78368 415 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 TP53BP2Q13625 1128 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 ERV3-1Q14264 604 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 SLC5A12Q1EHB4 618 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 LIPJQ5W064 366 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 ZNF548Q8NEK5 533 aaPredicted RBP13.26□□□□□ -0.29
LSS-201ENST00000356396 ATL1Q8WXF7 558 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 JADE3Q92613 823 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 RSC1A1Q92681 617 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 RAB7BQ96AH8 199 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 KAT8Q9H7Z6 458 aaKnown RBP13.26□□□□□ -0.29
LSS-201ENST00000356396 FZD4Q9ULV1 537 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 PTPRZ1P23471 2315 aaPredicted RBP13.26□□□□□ -0.29
LSS-201ENST00000356396 TCRBV5S2A0A599 114 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 SYNDIG1LA6NDD5 238 aa13.26□□□□□ -0.29
LSS-201ENST00000356396 GNGT2O14610 69 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms