RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 ATP6V1HQ9UI12 483 aa17.54■□□□□ 0.4
SPNS3-201ENST00000355530 PCDHGA2Q9Y5H1 932 aa17.54■□□□□ 0.4
SPNS3-201ENST00000355530 AGAP5A6NIR3 686 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 LEFTY2O00292 366 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 TNFRSF21O75509 655 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 ITGA2P17301 1181 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 IMPA1P29218 277 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 SERPINB1P30740 379 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 MVDP53602 400 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 SPIBQ01892 262 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 FPGSQ05932 587 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 ZNF763Q0D2J5 394 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 E2F2Q14209 437 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 GCNT6Q5T4J0 391 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 ZNF605Q86T29 641 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 RAVER1Q8IY67 606 aaKnown RBP17.53■□□□□ 0.4
SPNS3-201ENST00000355530 ZNF675Q8TD23 568 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 GGHQ92820 318 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 REPS1Q96D71 796 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 RAD9AQ99638 391 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 ZSCAN5AQ9BUG6 496 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 RAD18Q9NS91 495 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 TMEM184CQ9NVA4 438 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 CCDC59Q9P031 241 aaKnown RBP17.53■□□□□ 0.4
SPNS3-201ENST00000355530 ZNF229Q9UJW7 825 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 TRIM43BA6NCK2 446 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 WASH3PC4AMC7 463 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 TSPAN6O43657 245 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 SLC16A8O95907 504 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 OPN1SWP03999 348 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 BDKRB1P46663 353 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 IDH2P48735 452 aaKnown RBP17.53■□□□□ 0.4
SPNS3-201ENST00000355530 CCL23P55773 120 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 MICAQ29983 383 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 Q6ZVL8 140 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 DSG4Q86SJ6 1040 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 LYSMD2Q8IV50 215 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 LGI4Q8N135 537 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 OR52N2Q8NGI0 321 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 COL21A1Q96P44 957 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 REEP4Q9H6H4 257 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 POLE4Q9NR33 117 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 ANKMY1Q9P2S6 941 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 SLCO3A1Q9UIG8 710 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 UGT2A1Q9Y4X1 527 aa17.53■□□□□ 0.4
SPNS3-201ENST00000355530 PQBP1O60828 265 aaKnown RBP17.52■□□□□ 0.4
SPNS3-201ENST00000355530 ATG13O75143 517 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 SH3BGRLO75368 114 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 ADORA3P0DMS8 318 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 ETFAP13804 333 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 CDH12P55289 794 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 RPS13P62277 151 aaKnown RBP17.52■□□□□ 0.4
SPNS3-201ENST00000355530 OLR1P78380 273 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 SCARB2Q14108 478 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 CCSMST1Q4G0I0 132 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 HENMT1Q5T8I9 393 aaKnown RBP17.52■□□□□ 0.4
SPNS3-201ENST00000355530 MED27Q6P2C8 311 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 DEFB128Q7Z7B8 93 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 TMC8Q8IU68 726 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 HPS1Q92902 700 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 SLC35A5Q9BS91 424 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 NXF2Q9GZY0 626 aaKnown RBP17.52■□□□□ 0.4
SPNS3-201ENST00000355530 GPATCH2Q9NW75 528 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 EXO1Q9UQ84 846 aaKnown RBP17.52■□□□□ 0.4
SPNS3-201ENST00000355530 PCDHGA4Q9Y5G9 962 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 KCNE2Q9Y6J6 123 aa17.52■□□□□ 0.4
SPNS3-201ENST00000355530 FADS2P1A8MWK0 482 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 CTSAP10619 480 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 GABRB1P18505 474 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 TNFRSF1BP20333 461 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 ETV3P41162 512 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 RECQLP46063 649 aaPredicted RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 PREPP48147 710 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 HBA1P69905 142 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 EIF4HQ15056 248 aaKnown RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 EXOC3L2Q2M3D2 409 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF385BQ569K4 471 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 COLEC12Q5KU26 742 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 COX20Q5RI15 118 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 C10orf62Q5T681 223 aaPredicted RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 CCDC80Q76M96 950 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 NLRP8Q86W28 1048 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 OXR1Q8N573 874 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 OR2A12Q8NGT7 310 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 PKP4Q99569 1192 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 RIOK2Q9BVS4 552 aaKnown RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 C6orf62Q9GZU0 229 aaPredicted RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 TMEM38AQ9H6F2 299 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 ZNF556Q9HAH1 456 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 ABCB10Q9NRK6 738 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 RLIMQ9NVW2 624 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 IMPAD1Q9NX62 359 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 GPR83Q9NYM4 423 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 ENOPH1Q9UHY7 261 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 TEX28O15482 410 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 AOC2O75106 756 aa17.51■□□□□ 0.39
SPNS3-201ENST00000355530 RPL3P39023 403 aaKnown RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 MAGEA10P43363 369 aaPredicted RBP17.51■□□□□ 0.39
SPNS3-201ENST00000355530 PRLHRP49683 370 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms