RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PORP16435 677 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 ASMTP46597 345 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 C2orf80Q0P641 193 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 PPIGQ13427 754 aaKnown RBP eCLIP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 SOWAHCQ53LP3 525 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 NLGN4XQ8N0W4 816 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 TRAM1L1Q8N609 369 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 PSMA8Q8TAA3 256 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CHTF18Q8WVB6 975 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CCM2Q9BSQ5 444 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 ZSCAN5AQ9BUG6 496 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 SPHK2Q9NRA0 654 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 GPR83Q9NYM4 423 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 SLC6A14Q9UN76 642 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 PRKAB1Q9Y478 270 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 LYVE1Q9Y5Y7 322 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CCDC88CQ9P219 2028 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 K7ESM1 405 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 UGDHO60701 494 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CTSAP10619 480 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF8P17098 575 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 HOXB6P17509 224 aaKnown RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CHI3L1P36222 383 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 NNMTP40261 264 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 SERPINB10P48595 397 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CXCR4P61073 352 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF697Q5TEC3 545 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 PRSS48Q7RTY5 328 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 GPR155Q7Z3F1 870 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 COMMD6Q7Z4G1 85 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 TRMT11Q7Z4G4 463 aaKnown RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 OR10G2Q8NGC3 310 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 DYNC2LI1Q8TCX1 351 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 POP5Q969H6 163 aaKnown RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 TBC1D20Q96BZ9 403 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 C11orf24Q96F05 449 aaPredicted RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CEP44Q9C0F1 390 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 WDR12Q9GZL7 423 aaKnown RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 OR2AG1Q9H205 316 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 SPNS1Q9H2V7 528 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 NECTIN3Q9NQS3 549 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 SNX8Q9Y5X2 465 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 HSPE1-MOB4S4R3N1 261 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 PCM1Q15154 2024 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 NPIPB8E9PQR5 432 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 DBTP11182 482 aaKnown RBP18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CSF2RAP15509 400 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 SELENOWP63302 87 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 EXOC3L2Q2M3D2 409 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 ANXA8L1Q5VT79 327 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 ARMCX6Q7L4S7 300 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 RNF130Q86XS8 419 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CCDC103Q8IW40 242 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 PGBD3Q8N328 593 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 ING5Q8WYH8 240 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 CHST8Q9H2A9 424 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 RNF167Q9H6Y7 350 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 PLAGL1Q9UM63 463 aa18.79■□□□□ 0.6
COL13A1-201ENST00000354547 ZNF197O14709 1029 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 NPC1O15118 1278 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 KLK1P06870 262 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 MAGP20916 626 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 ACVR2AP27037 513 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 SLC19A1P41440 591 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 TAS2R50P59544 299 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 KCNC3Q14003 757 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 SLCO4C1Q6ZQN7 724 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 NEK10Q6ZWH5 1172 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 TDP1Q9NUW8 608 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 OR2A25A4D2G3 310 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 LILRB3O75022 631 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 AP2A2O94973 939 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 SCARB2Q14108 478 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 LGI4Q8N135 537 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 IL17FQ96PD4 163 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 C6orf62Q9GZU0 229 aaPredicted RBP18.78■□□□□ 0.6
COL13A1-201ENST00000354547 CCNB1IP1Q9NPC3 277 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.78■□□□□ 0.6
COL13A1-201ENST00000354547 TAS2R16Q9NYV7 291 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 BTNL2Q9UIR0 455 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 RAB23Q9ULC3 237 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 B3GNT3Q9Y2A9 372 aa18.78■□□□□ 0.6
COL13A1-201ENST00000354547 STSP08842 583 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 TPP2P29144 1249 aaPredicted RBP18.77■□□□□ 0.6
COL13A1-201ENST00000354547 SPIN4Q56A73 249 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 OR6Q1Q8NGQ2 317 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 MCFD2Q8NI22 146 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 HRASLS5Q96KN8 279 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 MAGEB10Q96LZ2 347 aaPredicted RBP18.77■□□□□ 0.6
COL13A1-201ENST00000354547 DCSTAMPQ9H295 470 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 IL36AQ9UHA7 158 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 SLC5A10A0PJK1 596 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 PRAMEF25A6NGN4 478 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 HIDE1A8MVS5 230 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 AIREO43918 545 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 ADAM23O75077 832 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 SYN1P17600 705 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 POU1F1P28069 291 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 TGFBR2P37173 567 aa18.77■□□□□ 0.6
COL13A1-201ENST00000354547 CARTPTQ16568 116 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms