RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 MYBPHQ13203 477 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 HERC3Q15034 1050 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CAMK4Q16566 473 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 XKR9Q5GH70 373 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SUMO4Q6EEV6 95 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ZYG11AQ6WRX3 759 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TRMT1LQ7Z2T5 733 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ANKRD46Q86W74 232 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CPSF7Q8N684 471 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PRR26Q8N8Z3 221 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF441Q8N8Z8 693 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 KBTBD3Q8NAB2 608 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TRPV3Q8NET8 790 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 OR2T3Q8NH03 318 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 GRHL3Q8TE85 626 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 GGHQ92820 318 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TANKQ92844 425 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 BTBD10Q9BSF8 475 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF665Q9H7R5 613 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 MAGEF1Q9HAY2 307 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SLC52A3Q9NQ40 469 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PKD2L2Q9NZM6 624 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SMC3Q9UQE7 1217 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SRPRBQ9Y5M8 271 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 KIF13BQ9NQT8 1826 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 A0A0U1RQJ8 604 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SDHDO14521 159 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 XPO1O14980 1071 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PIGNO95427 931 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PRF1P14222 555 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 POLR2CP19387 275 aaPredicted RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 C21orf33P30042 268 aaPredicted RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CTSCP53634 463 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 GAS1P54826 345 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 C21orf58P58505 322 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CCNA1P78396 465 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 IL24Q13007 206 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PTGR1Q14914 329 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 NR1D2Q14995 579 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 EXT1Q16394 746 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CCDC152Q4G0S7 254 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ELFN2Q5R3F8 820 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 C9orf50Q5SZB4 431 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 FJX1Q86VR8 437 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TTC9BQ8N6N2 239 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SEMA6DQ8NFY4 1073 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 RDM1Q8NG50 284 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 UBTD2Q8WUN7 234 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TMED6Q8WW62 240 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CKAP2Q8WWK9 683 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 OSTF1Q92882 214 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF416Q9BWM5 594 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TLE6Q9H808 572 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 MEAF6Q9HAF1 191 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CLEC4AQ9UMR7 237 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ITM2BQ9Y287 266 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 USP6P35125 1406 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 REV3LO60673 3130 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 AGLP35573 1532 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ARHGAP42A6NI28 874 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 MS4A18H0YCH9 400 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TEX28O15482 410 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 NOL3O60936 208 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 IFNA2P01563 188 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 IRF2P14316 349 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ARSBP15848 533 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 IL10P22301 178 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 EPHA2P29317 976 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TRIM23P36406 574 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 NUCB2P80303 420 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 RABEP1Q15276 862 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 OASLQ15646 514 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CARTPTQ16568 116 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ACKR1Q16570 336 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 KCTD21Q4G0X4 260 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF789Q5FWF6 425 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 DDX59Q5T1V6 619 aaKnown RBP eCLIP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CCNYL2Q5T2Q4 361 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CENPPQ6IPU0 288 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TTC27Q6P3X3 843 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ADCK1Q86TW2 530 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 GGNQ86UU5 652 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 LDLRAD3Q86YD5 345 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 FBXL14Q8N1E6 418 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF383Q8NA42 475 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 OR4L1Q8NH43 312 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ZNF671Q8TAW3 534 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 WFIKKN2Q8TEU8 576 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 DHX58Q96C10 678 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 LRFN5Q96NI6 719 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 COQ7Q99807 217 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CATSPERBQ9H7T0 1116 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 RMND5AQ9H871 391 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 ECT2Q9H8V3 914 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 KCNK13Q9HB14 408 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 TRNAU1APQ9NX07 287 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 MALT1Q9UDY8 824 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 PTBP2Q9UKA9 531 aaKnown RBP1.51□□□□□ -2.17
BRCA1-202ENST00000354071 SNX6Q9UNH7 406 aa1.51□□□□□ -2.17
BRCA1-202ENST00000354071 CD109Q6YHK3 1445 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms