RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 OMDQ99983 421 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 SLC25A51Q9H1U9 297 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 CAPN10Q9HC96 672 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 NR0B1P51843 470 aaKnown RBP12.24□□□□□ -0.45
COL6A3-203ENST00000353578 PMS2P3Q13401 168 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 IRF4Q15306 451 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 EPYCQ99645 322 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 CPVLQ9H3G5 476 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 TAS2R14Q9NYV8 317 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 RIC1Q4ADV7 1423 aa12.24□□□□□ -0.45
COL6A3-203ENST00000353578 hCG_2039718K7EN88 272 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 LRATO95237 230 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 BPNT1O95861 308 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ALPPP05187 535 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 TAS2R20P59543 309 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 RAB30Q15771 203 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 TATDN3Q17R31 274 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ZACNQ401N2 412 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 TM9SF4Q92544 642 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 BORCS7Q96B45 105 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 HSH2DQ96JZ2 352 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ACTRT3Q9BYD9 372 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 KCNMB3Q9NPA1 279 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 N6AMT1Q9Y5N5 214 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 OR2AG2A6NM03 316 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CREG1O75629 220 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ELP2Q6IA86 826 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 LRRC52Q8N7C0 313 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 TMEM185AQ8NFB2 350 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 KCNJ9Q92806 393 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ELMOD3Q96FG2 381 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CDHR4A6H8M9 788 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 TTLL8A6PVC2 850 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 PDGFAP04085 211 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ZNF578Q96N58 590 aaPredicted RBP12.23□□□□□ -0.45
COL6A3-203ENST00000353578 UROC1Q96N76 676 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 TIGARQ9NQ88 270 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 AGLP35573 1532 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 A8MVJ9 347 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 PIP5K1BO14986 540 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 IL1AP01583 271 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ZNF823P16415 610 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 SCNN1AP37088 669 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 EPHB3P54753 998 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 EMX2Q04743 252 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 HSPA14Q0VDF9 509 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 FBXL20Q96IG2 436 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 VPS25Q9BRG1 176 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 RAB11FIP5Q9BXF6 653 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 C12orf10Q9HB07 376 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 APMAPQ9HDC9 416 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ENY2Q9NPA8 101 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 MED31Q9Y3C7 131 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 NPEPPSL1A6NEC2 478 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CXCR3P49682 368 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CHAF1BQ13112 559 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 PGM5Q15124 567 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CARNMT1Q8N4J0 409 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CELF1Q92879 486 aaKnown RBP12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ST6GALNAC4Q9H4F1 302 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 IPPKQ9H8X2 491 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 HTR1AP08908 422 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ITGAMP11215 1152 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CREB5Q02930 508 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 UBXN2BQ14CS0 331 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 MAPK14Q16539 360 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ACOT11Q8WXI4 607 aaPredicted RBP12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CCDC120Q96HB5 630 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 MGLLQ99685 303 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 MKKSQ9NPJ1 570 aaPredicted RBP12.23□□□□□ -0.45
COL6A3-203ENST00000353578 FAM212BQ9NTI7 297 aaPredicted RBP12.23□□□□□ -0.45
COL6A3-203ENST00000353578 FAM118AQ9NWS6 357 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 DUSP4Q13115 394 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 DUSP6Q16828 381 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 SLC27A4Q6P1M0 643 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 MED27Q6P2C8 311 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 GPAT4Q86UL3 456 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 CACUL1Q86Y37 369 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 PLD5Q8N7P1 536 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 OR56A1Q8NGH5 318 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 APOLD1Q96LR9 279 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 SAMD10Q9BYL1 202 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 RNF13O43567 381 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 ST3GAL3Q11203 375 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 BCL2L15Q5TBC7 163 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 REEP3Q6NUK4 255 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 MFSD6LQ8IWD5 586 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 RHOXF1Q8NHV9 184 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 RBCK1Q9BYM8 510 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 TEX10Q9NXF1 929 aaPredicted RBP12.23□□□□□ -0.45
COL6A3-203ENST00000353578 PRELID3BQ9Y3B1 194 aa12.23□□□□□ -0.45
COL6A3-203ENST00000353578 INHAP05111 366 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 RNH1P13489 461 aaKnown RBP12.22□□□□□ -0.45
COL6A3-203ENST00000353578 CD34P28906 385 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 ENPP7Q6UWV6 458 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 AQP11Q8NBQ7 271 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 OR11A1Q9GZK7 315 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 PORCNQ9H237 461 aa12.22□□□□□ -0.45
COL6A3-203ENST00000353578 INPP5EQ9NRR6 644 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms