RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 MANBAO00462 879 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ADAMDEC1O15204 470 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 SOX14O95416 240 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ANXA8P13928 327 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 NAGAP17050 411 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 CNR2P34972 360 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ACVRL1P37023 503 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 CRATP43155 626 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TTPAP49638 278 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 PTPN5P54829 565 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 RGS1Q08116 209 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 HSPA14Q0VDF9 509 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 SDHAF4Q5VUM1 108 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 LAMTOR1Q6IAA8 161 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 BHLHB9Q6PI77 547 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 LBX2Q6XYB7 198 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 OTOP2Q7RTS6 562 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF551Q7Z340 670 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 BBS7Q8IWZ6 715 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 CLECL1Q8IZS7 167 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 OR4M2Q8NGB6 313 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ARRDC2Q8TBH0 407 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TESCQ96BS2 214 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 OPALINQ96PE5 141 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TCF25Q9BQ70 676 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 C2orf49Q9BVC5 232 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 ZYG11BQ9C0D3 744 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TMEM161AQ9NX61 479 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 EIF3KQ9UBQ5 218 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 STUB1Q9UNE7 303 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 VPS9D1Q9Y2B5 631 aa7.36□□□□□ -1.23
BRCA1-201ENST00000352993 SPIN1Q9Y657 262 aaPredicted RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 CFAP20Q9Y6A4 193 aaKnown RBP7.36□□□□□ -1.23
BRCA1-201ENST00000352993 TTC3P53804 2025 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 APOL3O95236 402 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 KCNK5O95279 499 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 ENPP1P22413 925 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 RGS4P49798 205 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 LRRC32Q14392 662 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 PTGES3Q15185 160 aaKnown RBP7.35□□□□□ -1.23
BRCA1-201ENST00000352993 PTPRRQ15256 657 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 CRTC2Q53ET0 693 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-201ENST00000352993 ERICH5Q6P6B1 374 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 MBOAT1Q6ZNC8 495 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 ANKS3Q6ZW76 656 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 CBLL1Q75N03 491 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 ATCAYQ86WG3 371 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 REPS1Q96D71 796 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 C1QTNF3Q9BXJ4 246 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 FAM126AQ9BYI3 521 aaPredicted RBP7.35□□□□□ -1.23
BRCA1-201ENST00000352993 ERVMER34-1Q9H9K5 563 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 HHATLQ9HCP6 504 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 ATP13A1Q9HD20 1204 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 ABCC13Q9NSE7 274 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 FZD4Q9ULV1 537 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 NCKAP1Q9Y2A7 1128 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 SLC9A8Q9Y2E8 581 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 MYO10Q9HD67 2058 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 PCNTO95613 3336 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 IL1RNP18510 177 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 PCSK1P29120 753 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 LRRC74AQ0VAA2 488 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 EFEMP1Q12805 493 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 NCF4Q15080 339 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 FCN2Q15485 313 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 SLC39A12Q504Y0 691 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 TIGD3Q6B0B8 471 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 CNIH2Q6PI25 160 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 CFAP77Q6ZQR2 320 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 CCDC149Q6ZUS6 474 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 CEP76Q8TAP6 659 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 TMEM80Q96HE8 168 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 EPYCQ99645 322 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 GABARAPL3Q9BY60 117 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 CDCP1Q9H5V8 836 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 SERHLQ9NQF3 203 aa7.35□□□□□ -1.23
BRCA1-201ENST00000352993 RBFOX1Q9NWB1 397 aaKnown RBP7.35□□□□□ -1.23
BRCA1-201ENST00000352993 LOC285095A0A1B0GVY8 99 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PIPSLA2A3N6 862 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF670-ZNF695F2Z2N8 137 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 ENTPD6O75354 484 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TOXO94900 526 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TSPAN12O95859 305 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PDYNP01213 254 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 IFNA16P05015 189 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 FCER2P06734 321 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MSL3P1P0C860 447 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PGFP49763 221 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 AKR1D1P51857 326 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MLLT6P55198 1093 aaPredicted RBP7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PER3P56645 1201 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 CLDN8P56748 225 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MGAT3Q09327 533 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 BCL2L15Q5TBC7 163 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TMEM65Q6PI78 240 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 PAQR6Q6TCH4 344 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TEX261Q6UWH6 196 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 TMIGD1Q6UXZ0 262 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 KRT74Q7RTS7 529 aa7.34□□□□□ -1.23
BRCA1-201ENST00000352993 MICALL2Q8IY33 904 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms