RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 OR52N2Q8NGI0 321 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 HRASLS5Q96KN8 279 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 PRM3Q9NNZ6 103 aa21.25■□□□□ 0.99
UPF3A-201ENST00000351487 DENND4AQ7Z401 1863 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 K7ESM1 405 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 RRM2P31350 389 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 MASP1P48740 699 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 ELP6Q0PNE2 266 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 STARD3Q14849 445 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 TCEAL5Q5H9L2 206 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 GRASPQ7Z6J2 395 aaPredicted RBP21.24■□□□□ 0.99
UPF3A-201ENST00000351487 PARP8Q8N3A8 854 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 SVOPQ8N4V2 548 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 ABHD11Q8NFV4 315 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 OR4K1Q8NGD4 311 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 POF1BQ8WVV4 589 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 SLC5A11Q8WWX8 675 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 ING5Q8WYH8 240 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 ABTB1Q969K4 478 aaPredicted RBP21.24■□□□□ 0.99
UPF3A-201ENST00000351487 YIPF6Q96EC8 236 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 ZNF514Q96K75 400 aaPredicted RBP21.24■□□□□ 0.99
UPF3A-201ENST00000351487 LRRC3BQ96PB8 259 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 SIGLEC11Q96RL6 698 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 C11orf49Q9H6J7 331 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 RAPGEFL1Q9UHV5 662 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 TSC22D4Q9Y3Q8 395 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 C17orf113A0A1B0GUU1 675 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 ADAMDEC1O15204 470 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 SLC22A1O15245 554 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 FSHRP23945 695 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 KRT20P35900 424 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 PXNP49023 591 aaPredicted RBP21.24■□□□□ 0.99
UPF3A-201ENST00000351487 RPP38P78345 283 aaKnown RBP21.24■□□□□ 0.99
UPF3A-201ENST00000351487 HIST2H2ACQ16777 129 aaPredicted RBP21.24■□□□□ 0.99
UPF3A-201ENST00000351487 COX20Q5RI15 118 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 HIST2H2AA3Q6FI13 130 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 ZNF852Q6ZMS4 543 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 SLC15A4Q8N697 577 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 SLC35A5Q9BS91 424 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 DPEP2Q9H4A9 486 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 TMEM38AQ9H6F2 299 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 NDUFAF4Q9P032 175 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 LYVE1Q9Y5Y7 322 aa21.24■□□□□ 0.99
UPF3A-201ENST00000351487 RGS10O43665 173 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 WBP4O75554 376 aaKnown RBP21.23■□□□□ 0.99
UPF3A-201ENST00000351487 ZBTB11O95625 1053 aaPredicted RBP21.23■□□□□ 0.99
UPF3A-201ENST00000351487 C6orf47O95873 294 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 EPCAMP16422 314 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 CTNNB1P35222 781 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 BMPR1AP36894 532 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 PIK3CBP42338 1070 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 CRATP43155 626 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 DPTQ07507 201 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 FADDQ13158 208 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 GCNT6Q5T4J0 391 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 FAM71E1Q6IPT2 247 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 NXPE4Q6UWF7 544 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 LINC00299Q6ZSB3 139 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 PRSS48Q7RTY5 328 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 ZNF547Q8IVP9 402 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 METTL4Q8N3J2 472 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 ZNF540Q8NDQ6 660 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 TMIEQ8NEW7 156 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 SP7Q8TDD2 431 aaPredicted RBP21.23■□□□□ 0.99
UPF3A-201ENST00000351487 C16orf78Q8WTQ4 265 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 IPCEF1Q8WWN9 437 aaPredicted RBP21.23■□□□□ 0.99
UPF3A-201ENST00000351487 ARRDC3Q96B67 414 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 PPCDCQ96CD2 204 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 MTERF3Q96E29 417 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 RUBCNLQ9H714 662 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 NECTIN3Q9NQS3 549 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 B3GNT3Q9Y2A9 372 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 AXIN1O15169 862 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 GPR37L1O60883 481 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 KLHL18O94889 574 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 PAPLNO95428 1278 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 ADH1CP00326 375 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 MT-ND2P03891 347 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 ETFAP13804 333 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 NR4A1P22736 598 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 ACADLP28330 430 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 MAP2K4P45985 399 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 GPR1P46091 355 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 MPEG1Q2M385 716 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 RAET1GQ6H3X3 334 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 DUS1LQ6P1R4 473 aaKnown RBP21.23■□□□□ 0.99
UPF3A-201ENST00000351487 CCDC80Q76M96 950 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 ZBTB46Q86UZ6 589 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 CELF5Q8N6W0 485 aaKnown RBP21.23■□□□□ 0.99
UPF3A-201ENST00000351487 SPPL3Q8TCT6 385 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 GIPC3Q8TF64 312 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 PAWRQ96IZ0 340 aaKnown RBP21.23■□□□□ 0.99
UPF3A-201ENST00000351487 SPNS1Q9H2V7 528 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 OR51B5Q9H339 312 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 TRIM39Q9HCM9 518 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 CCDC177Q9NQR7 707 aaPredicted RBP21.23■□□□□ 0.99
UPF3A-201ENST00000351487 RHBDL2Q9NX52 303 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 CORINQ9Y5Q5 1042 aa21.23■□□□□ 0.99
UPF3A-201ENST00000351487 PCDHGA12O60330 932 aa21.22■□□□□ 0.99
UPF3A-201ENST00000351487 FAM20BO75063 409 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms