RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PON2Q15165 354 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 TMEM44Q2T9K0 475 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 HMBOX1Q6NT76 420 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 BHLHA9Q7RTU4 235 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 RANBP3LQ86VV4 465 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 FZD4Q9ULV1 537 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 DMTF1Q9Y222 760 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 AURKAO14965 403 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 MTRF1O75570 445 aaKnown RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 MAGEA10P43363 369 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 NCBP2P52298 156 aaKnown RBP eCLIP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 DOC2AQ14183 400 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 CTSL3PQ5NE16 218 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 DEF8Q6ZN54 512 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 ANKRD46Q86W74 232 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 ART5Q96L15 291 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 STOX2Q9P2F5 926 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 MMP2P08253 660 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 PSMB9P28065 219 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 DCST1Q5T197 706 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 DENND6BQ8NEG7 585 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 METTL21AQ8WXB1 218 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 GEMIN6Q8WXD5 167 aaKnown RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 LRTOMTQ8WZ04 291 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 C6orf62Q9GZU0 229 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 CNOT6Q9ULM6 557 aaKnown RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 PCDHB3Q9Y5E6 796 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 ENTPD2Q9Y5L3 495 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 MYOCOSA0A1B0GUC4 107 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 TMEM150CB9EJG8 249 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 C7P10643 843 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 UQCRC2P22695 453 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 PEX2P28328 305 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 ALDH4A1P30038 563 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 HSPB3Q12988 150 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 GGTA1PQ4G0N0 100 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 SPANXN4Q5MJ08 99 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 PNCKQ6P2M8 343 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 SLC2A7Q6PXP3 512 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 SDR39U1Q9NRG7 319 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 PDP1Q9P0J1 537 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 PRAMEF26H0Y7S4 382 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 GTPBP1O00178 669 aaKnown RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 NOS1APO75052 506 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 OLFM2O95897 454 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 BCKDHAP12694 445 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 CCDC157Q569K6 752 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 PRRT3Q5FWE3 981 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 EGFLAMQ63HQ2 1017 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 ADAMTSL4Q6UY14 1074 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 RASSF6Q6ZTQ3 369 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 ASRGL1Q7L266 308 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 RDH12Q96NR8 316 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 ASB16Q96NS5 453 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 CCNB2O95067 398 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 OR6A2O95222 327 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 CCNA2P20248 432 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 NUP62P37198 522 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 CAPGP40121 348 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 LILRA6Q6PI73 481 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 POC5Q8NA72 575 aa11.73□□□□□ -0.53
SMAD9-201ENST00000350148 PRR11Q96HE9 360 aaPredicted RBP11.73□□□□□ -0.53
SMAD9-201ENST00000350148 B4GALT3O60512 393 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ERVPABLB-1P60509 514 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 SPANXN2Q5MJ10 180 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ERMP1Q7Z2K6 904 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 DNASE1L2Q92874 299 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 HSPBAP1Q96EW2 488 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 PKP4Q99569 1192 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 CIB1Q99828 191 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 GPATCH1Q9BRR8 931 aaKnown RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 APOOQ9BUR5 198 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 TPT1P8Q9HAU6 139 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 C9JVG2 144 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 IFNGP01579 166 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 KCNA5P22460 613 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 MLLT3P42568 568 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 KCNC1P48547 511 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 CDKN1CP49918 316 aaPredicted RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ZFP69Q49AA0 526 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 C6orf52Q5T4I8 152 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ARMC8Q8IUR7 673 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ZCCHC10Q8TBK6 192 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ASB11Q8WXH4 323 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 KCNC2Q96PR1 638 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 PELOQ9BRX2 385 aaKnown RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ABCG4Q9H172 646 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ZCCHC3Q9NUD5 404 aaKnown RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 B4DGG1 531 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 H0YJX3 145 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ALPPP05187 535 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 LAMP2P13473 410 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 HSD17B1P14061 328 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 CD247P20963 164 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 ATP5A1P25705 553 aaKnown RBP11.72□□□□□ -0.53
SMAD9-201ENST00000350148 DGKQP52824 942 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 RHAGQ02094 409 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 CBR4Q8N4T8 237 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 OR4E2Q8NGC2 313 aa11.72□□□□□ -0.53
SMAD9-201ENST00000350148 GABRB3P28472 473 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms