RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 ZNF783Q6ZMS7 281 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 PIWIL3Q7Z3Z3 882 aaKnown RBP12.79□□□□□ -0.36
CASC4-202ENST00000345795 FAM217AQ8IXS0 508 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 PDPRQ8NCN5 879 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 CCL4L1Q8NHW4 92 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 FGF14Q92915 247 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 SELENONQ9NZV5 590 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 EDDM13A0A1B0GTR0 161 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 SNUPNO95149 360 aaKnown RBP12.79□□□□□ -0.36
CASC4-202ENST00000345795 ZNF30P17039 623 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 ENTPD1P49961 510 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 PFN3P60673 137 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 RPL26P61254 145 aaKnown RBP12.79□□□□□ -0.36
CASC4-202ENST00000345795 HBA1P69905 142 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 SCARB2Q14108 478 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 CST6Q15828 149 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 HNRNPA1L2Q32P51 320 aaKnown RBP12.79□□□□□ -0.36
CASC4-202ENST00000345795 TTC23Q5W5X9 447 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 AHSPQ9NZD4 102 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 PCDHA9Q9Y5H5 950 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 B4DGG1 531 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 HOXB3P14651 431 aaPredicted RBP12.79□□□□□ -0.36
CASC4-202ENST00000345795 JUPP14923 745 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 CD9P21926 228 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 IDSP22304 550 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 SHMT2P34897 504 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 PNLIPRP1P54315 467 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 BTN3A2P78410 334 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 DUOXA1Q1HG43 343 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 LEXMQ3ZCV2 418 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 GALNT18Q6P9A2 607 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 TAF8Q7Z7C8 310 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 TRAM1L1Q8N609 369 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 C12orf43Q96C57 262 aaKnown RBP12.79□□□□□ -0.36
CASC4-202ENST00000345795 DPH7Q9BTV6 452 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 MKRN2Q9H000 416 aaKnown RBP12.79□□□□□ -0.36
CASC4-202ENST00000345795 ATAD3AQ9NVI7 634 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 ENTPD4Q9Y227 616 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 SCN4AP35499 1836 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 BPTFQ12830 3046 aa12.79□□□□□ -0.36
CASC4-202ENST00000345795 HYAL3O43820 417 aaPredicted RBP12.78□□□□□ -0.36
CASC4-202ENST00000345795 PRAMEF4O60810 478 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 HNMTP50135 292 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 ROR2Q01974 943 aaKnown RBP12.78□□□□□ -0.36
CASC4-202ENST00000345795 TFF2Q03403 129 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 RAPSNQ13702 412 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 NKG7Q16617 165 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 RFX4Q33E94 735 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 BROXQ5VW32 411 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 PRAMEF9Q5VWM5 478 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 PLEKHA8Q96JA3 519 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 FAM192AQ9GZU8 254 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 TRIT1Q9H3H1 467 aaKnown RBP12.78□□□□□ -0.36
CASC4-202ENST00000345795 CD300AQ9UGN4 299 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 SAMD4AQ9UPU9 718 aaKnown RBP12.78□□□□□ -0.36
CASC4-202ENST00000345795 PCDHGA8Q9Y5G5 932 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 AMD1P17707 334 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 CD22P20273 847 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 KDELR2P33947 212 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 VBP1P61758 197 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 VLDLRP98155 873 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 GALNT1Q10472 559 aaPredicted RBP12.78□□□□□ -0.36
CASC4-202ENST00000345795 CYBRD1Q53TN4 286 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 C10orf53Q8N6V4 93 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 REPS1Q96D71 796 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 PYURFQ96I23 114 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 CHCHD6Q9BRQ6 235 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 RSPH9Q9H1X1 276 aaPredicted RBP12.78□□□□□ -0.36
CASC4-202ENST00000345795 SEMA3GQ9NS98 782 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 DNAJB9Q9UBS3 223 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 LOC100130705A0A1B0GUX0 176 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 TCRBV3S1A0A5B6 114 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 ERN1O75460 977 aaKnown RBP12.78□□□□□ -0.36
CASC4-202ENST00000345795 ALAS2P22557 587 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 AZGP1P25311 298 aaKnown RBP12.78□□□□□ -0.36
CASC4-202ENST00000345795 CCR3P51677 355 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 ABHD18Q0P651 414 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 RUNDC3AQ59EK9 446 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 ALG1LQ6GMV1 187 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 OR2T5Q6IEZ7 315 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 ARMC6Q6NXE6 501 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 DLEU7Q6UYE1 221 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 FAM46DQ8NEK8 389 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 OR2T29Q8NH02 315 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 OR4K3Q96R72 315 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 SOHLH2Q9NX45 425 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 DOCK8Q8NF50 2099 aa12.78□□□□□ -0.36
CASC4-202ENST00000345795 VPS13AQ96RL7 3174 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 OR2W5A6NFC9 320 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 A8MU76 341 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 PI15O43692 258 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 MATN4O95460 622 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 OR12D1P0DN82 309 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 IL1RNP18510 177 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 SUOXP51687 545 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 SIM1P81133 766 aaPredicted RBP12.77□□□□□ -0.36
CASC4-202ENST00000345795 UBXN2BQ14CS0 331 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 UGT8Q16880 541 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 AMZ1Q400G9 498 aa12.77□□□□□ -0.36
CASC4-202ENST00000345795 GCNT6Q5T4J0 391 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms