RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 DMRT3Q9NQL9 472 aa20.56■□□□□ 0.88
CCDC38-201ENST00000344280 TDRKHQ9Y2W6 561 aaKnown RBP20.56■□□□□ 0.88
CCDC38-201ENST00000344280 CLPXO76031 633 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 PCGF2P35227 344 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 OR1E2P47887 323 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 C21orf59P57076 290 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 ST8SIA6P61647 398 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 MAD2L1BPQ15013 274 aaPredicted RBP20.55■□□□□ 0.88
CCDC38-201ENST00000344280 ANKRD13BQ86YJ7 626 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 OR5AK3PQ8NH89 298 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 HCAR2Q8TDS4 363 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 PLEKHA8Q96JA3 519 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 SORBS1Q9BX66 1292 aaKnown RBP20.55■□□□□ 0.88
CCDC38-201ENST00000344280 ZDHHC4Q9NPG8 344 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 PLAGL1Q9UM63 463 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 PCDHGB1Q9Y5G3 927 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 RANBP2P49792 3224 aaKnown RBP20.55■□□□□ 0.88
CCDC38-201ENST00000344280 PCDHGA12O60330 932 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 C9P02748 559 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 C1GALT1C1LP0DN25 315 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 C6P13671 934 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 KRT20P35900 424 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 BMPR1AP36894 532 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 GPR1P46091 355 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 RPP38P78345 283 aaKnown RBP20.55■□□□□ 0.88
CCDC38-201ENST00000344280 NPRL3Q12980 569 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 CAMK2GQ13555 558 aaPredicted RBP20.55■□□□□ 0.88
CCDC38-201ENST00000344280 CYP27C1Q4G0S4 372 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 BCL7AQ4VC05 210 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 CCDC81Q6ZN84 652 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 Q6ZNX1 250 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 LAS2Q8IYD9 372 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 C11orf65Q8NCR3 313 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 OR9A1PQ8NGU1 263 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 SPPL2AQ8TCT8 520 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 NUS1Q96E22 293 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 DOHHQ9BU89 302 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 EPHX3Q9H6B9 360 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 NDUFAF4Q9P032 175 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 ZNF282Q9UDV7 671 aaPredicted RBP20.55■□□□□ 0.88
CCDC38-201ENST00000344280 ATP6V1HQ9UI12 483 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 TESMINQ9Y4I5 508 aa20.55■□□□□ 0.88
CCDC38-201ENST00000344280 PRAMEF25A6NGN4 478 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 PSMD11O00231 422 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 WBP4O75554 376 aaKnown RBP20.54■□□□□ 0.88
CCDC38-201ENST00000344280 MT-ND2P03891 347 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 ACVR2AP27037 513 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 FAM83HQ6ZRV2 1179 aaPredicted RBP20.54■□□□□ 0.88
CCDC38-201ENST00000344280 FBXO15Q8NCQ5 510 aaPredicted RBP20.54■□□□□ 0.88
CCDC38-201ENST00000344280 ZNF540Q8NDQ6 660 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 APH1BQ8WW43 257 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 APOL4Q9BPW4 351 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 SLC35A5Q9BS91 424 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 BHLHE41Q9C0J9 482 aaPredicted RBP20.54■□□□□ 0.88
CCDC38-201ENST00000344280 RUBCNLQ9H714 662 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 TRIM39Q9HCM9 518 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 TBC1D23Q9NUY8 699 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 ADPRHL2Q9NX46 363 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 DYRK1BQ9Y463 629 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 GMEB1Q9Y692 573 aa20.54■□□□□ 0.88
CCDC38-201ENST00000344280 TNFRSF21O75509 655 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 PAPLNO95428 1278 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 FADS2O95864 444 aaKnown RBP20.53■□□□□ 0.88
CCDC38-201ENST00000344280 KLK1P06870 262 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 FURINP09958 794 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 ALDH4A1P30038 563 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 TAS2R50P59544 299 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 LSM3P62310 102 aaKnown RBP20.53■□□□□ 0.88
CCDC38-201ENST00000344280 DGCR6Q14129 220 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 C9orf64Q5T6V5 341 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 GPR153Q6NV75 609 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 TSPYL5Q86VY4 417 aaPredicted RBP20.53■□□□□ 0.88
CCDC38-201ENST00000344280 C16orf78Q8WTQ4 265 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 SLC5A11Q8WWX8 675 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 RORBQ92753 470 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 WDR34Q96EX3 536 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 SPATA9Q9BWV2 254 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 PADI2Q9Y2J8 665 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 TPRKBQ9Y3C4 175 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 HSPE1-MOB4S4R3N1 261 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 FOXE1O00358 373 aaPredicted RBP20.53■□□□□ 0.88
CCDC38-201ENST00000344280 ZNF197O14709 1029 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 POP7O75817 140 aaKnown RBP20.53■□□□□ 0.88
CCDC38-201ENST00000344280 FUT4P22083 530 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 SELENOWP63302 87 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 C2orf80Q0P641 193 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 ABHD11Q8NFV4 315 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 OR52J3Q8NH60 311 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 GIPC3Q8TF64 312 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 ZNF707Q96C28 371 aaPredicted RBP20.53■□□□□ 0.88
CCDC38-201ENST00000344280 REPS1Q96D71 796 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 KCNC2Q96PR1 638 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 EPYCQ99645 322 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 RLIMQ9NVW2 624 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 CORO2BQ9UQ03 480 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 MRPS23Q9Y3D9 190 aaKnown RBP20.53■□□□□ 0.88
CCDC38-201ENST00000344280 LYVE1Q9Y5Y7 322 aa20.53■□□□□ 0.88
CCDC38-201ENST00000344280 SLC9A3R1O14745 358 aaPredicted RBP20.52■□□□□ 0.88
CCDC38-201ENST00000344280 PRNPP04156 253 aa20.52■□□□□ 0.88
CCDC38-201ENST00000344280 PPIBP23284 216 aaKnown RBP20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms