RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ZNF548Q8NEK5 533 aaPredicted RBP11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 PIK3R3Q92569 461 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 UBE2E3Q969T4 207 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 CLIP3Q96DZ5 547 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 TMEM246Q9BRR3 403 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 TTTY10Q9BZA0 68 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 IGFLR1Q9H665 355 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 MCUBQ9NWR8 336 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 ABCD2Q9UBJ2 740 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 SNX7Q9UNH6 387 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 NDUFB5O43674 189 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 GALTP07902 379 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 CCR4P51679 360 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 SGSHP51688 502 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 DSTNP60981 165 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 TUBA1BP68363 451 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 MC1RQ01726 317 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 RING1Q06587 406 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 TUBA1AQ71U36 451 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 SHFQ7M4L6 423 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 LRRC70Q7Z2Q7 622 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 IFNL1Q8IU54 200 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 DOK4Q8TEW6 326 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 KLHL6Q8WZ60 621 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 RBM38Q9H0Z9 239 aaKnown RBP11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 IL37Q9NZH6 218 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 MAT2BQ9NZL9 334 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 IL20RAQ9UHF4 553 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 BRWD1Q9NSI6 2320 aa11.99□□□□□ -0.49
SNRNP48-201ENST00000342415 FAM92AA1XBS5 289 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 OR7A17O14581 309 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 INPPL1O15357 1258 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 MMP2P08253 660 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC35G4P0C7Q5 338 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 ITIH1P19827 911 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 HOXD9P28356 352 aaPredicted RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 IFNGR2P38484 337 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 RPL3P39023 403 aaKnown RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 HNRNPA0Q13151 305 aaKnown RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 CTU2Q2VPK5 515 aaKnown RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 ADPRMQ3LIE5 342 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 CARD16Q5EG05 197 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 IQCHQ86VS3 1027 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 TSPYL5Q86VY4 417 aaPredicted RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 LRRC17Q8N6Y2 441 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 GPR26Q8NDV2 337 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 GPR150Q8NGU9 434 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 POF1BQ8WVV4 589 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 SUSD6Q92537 303 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 PIGKQ92643 395 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 WACQ9BTA9 647 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 FAM120CQ9NX05 1096 aaKnown RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 BOLA1Q9Y3E2 137 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 HCN4Q9Y3Q4 1203 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 E7EQ34 232 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 OAZ2O95190 189 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 OR5F1O95221 314 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 FCER2P06734 321 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 CSTF1Q05048 431 aaKnown RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 SPATS1Q496A3 300 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 IDNKQ5T6J7 187 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 CCM2Q9BSQ5 444 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 DOHHQ9BU89 302 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC2A11Q9BYW1 496 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 NECTIN3Q9NQS3 549 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 TRPS1Q9UHF7 1281 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 GPSM3Q9Y4H4 160 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 KIAA1217Q5T5P2 1943 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 NPIPB15A6NHN6 443 aaPredicted RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 GNB5O14775 395 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 FGBP02675 491 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 EPHA2P29317 976 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 CNR2P34972 360 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 HNMTP50135 292 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 RGS8P57771 180 aaPredicted RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 SMIM11AP58511 58 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 NDUFA5Q16718 116 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 UGT8Q16880 541 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 PLPP4Q5VZY2 271 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 C22orf42Q6IC83 251 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 RNF44Q7L0R7 432 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 LHFPL3Q86UP9 236 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 ZNF433Q8N7K0 673 aaPredicted RBP11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 FLCNQ8NFG4 579 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC39A13Q96H72 371 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 IRF2BPLQ9H1B7 796 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 RNF167Q9H6Y7 350 aa11.98□□□□□ -0.49
SNRNP48-201ENST00000342415 RBM47A0AV96 593 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 SLC16A8O95907 504 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 CAPNS1P04632 268 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 SAGP10523 405 aaPredicted RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 SOX3P41225 446 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 MAGEA11P43364 429 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 NKX3-2P78367 333 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 LMAN2Q12907 356 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 HEPACAMQ14CZ8 416 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 SHQ1Q6PI26 577 aaKnown RBP11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 BEND5Q7L4P6 421 aa11.97□□□□□ -0.49
SNRNP48-201ENST00000342415 ZSWIM9Q86XI8 627 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms