RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 ABHD17AQ96GS6 310 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 SLC25A23Q9BV35 468 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 SLC6A16Q9GZN6 736 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 ACTR8Q9H981 624 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 COPG2Q9UBF2 871 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.18■□□□□ 0.5
SYNE4-202ENST00000340477 ASB1Q9Y576 335 aa18.18■□□□□ 0.5
SYNE4-202ENST00000340477 HEMK1Q9Y5R4 338 aaPredicted RBP18.18■□□□□ 0.5
SYNE4-202ENST00000340477 V9GYY5 206 aaPredicted RBP18.18■□□□□ 0.5
SYNE4-202ENST00000340477 SMIM23A6NLE4 172 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 IDSB3KWA1 339 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 STX16-NPEPL1H3BU86 382 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 STX16O14662 325 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 GALR3O60755 368 aaPredicted RBP18.17■□□□□ 0.5
SYNE4-202ENST00000340477 DNAJB5O75953 348 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 PRB1P04280 392 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 GSTA1P08263 222 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 CYC1P08574 325 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 IL10P22301 178 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 XCR1P46094 333 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 SLCO1A2P46721 670 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 PHEXP78562 749 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 IFFO1Q0D2I5 559 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 NFATC3Q12968 1075 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 GTF2H2Q13888 395 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 SYT16Q17RD7 645 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 DCAF10Q5QP82 559 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 GTF2H2CQ6P1K8 395 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 MED27Q6P2C8 311 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 ZC3H7AQ8IWR0 971 aaKnown RBP18.17■□□□□ 0.5
SYNE4-202ENST00000340477 AFAP1L2Q8N4X5 818 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 CREB3L4Q8TEY5 395 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 ATP6V1E2Q96A05 226 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 REPS1Q96D71 796 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 PHF21BQ96EK2 531 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 TRIM55Q9BYV6 548 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 SEMA4CQ9C0C4 833 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 CLK4Q9HAZ1 481 aaKnown RBP18.17■□□□□ 0.5
SYNE4-202ENST00000340477 C19orf25Q9UFG5 118 aaPredicted RBP18.17■□□□□ 0.5
SYNE4-202ENST00000340477 FBXL4Q9UKA2 621 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 MKL2Q9ULH7 1088 aa18.17■□□□□ 0.5
SYNE4-202ENST00000340477 ZNF860A6NHJ4 632 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 PSMD12O00232 456 aaPredicted RBP18.16■□□□□ 0.5
SYNE4-202ENST00000340477 CDH16O75309 829 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 SHBGP04278 402 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 PCNAP12004 261 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 JAK1P23458 1154 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 EEF1DP29692 281 aaKnown RBP18.16■□□□□ 0.5
SYNE4-202ENST00000340477 HSD17B3P37058 310 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 CASP2P42575 452 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 PGDP52209 483 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 RAB8AP61006 207 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 GRHL2Q6ISB3 625 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 TRIM40Q6P9F5 258 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 PDSS2Q86YH6 399 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 TDRPQ86YL5 185 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 UTP15Q8TED0 518 aaKnown RBP18.16■□□□□ 0.5
SYNE4-202ENST00000340477 OR1F2PQ96R84 312 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 COPS7BQ9H9Q2 264 aaPredicted RBP18.16■□□□□ 0.5
SYNE4-202ENST00000340477 ATP13A2Q9NQ11 1180 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 ADGRE2Q9UHX3 823 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 PCDHGA9Q9Y5G4 932 aaKnown RBP18.16■□□□□ 0.5
SYNE4-202ENST00000340477 HS3ST3B1Q9Y662 390 aa18.16■□□□□ 0.5
SYNE4-202ENST00000340477 COL6A6A6NMZ7 2263 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 GOLGA8RI6L899 631 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 SOCS6O14544 535 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 ERI3O43414 337 aaKnown RBP18.15■□□□□ 0.5
SYNE4-202ENST00000340477 UGDHO60701 494 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 WFS1O76024 890 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 BMP10O95393 424 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 ALPPP05187 535 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 TUBBP07437 444 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 PYGBP11216 843 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 EPORP19235 508 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 CCNG1P51959 295 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 PCDH1Q08174 1060 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 AIMP2Q13155 320 aaKnown RBP18.15■□□□□ 0.5
SYNE4-202ENST00000340477 ERCC6LQ2NKX8 1250 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 LIPJQ5W064 366 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 TCTN3Q6NUS6 607 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 GOLGA7Q7Z5G4 137 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 SRFBP1Q8NEF9 429 aaKnown RBP18.15■□□□□ 0.5
SYNE4-202ENST00000340477 AENQ8WTP8 325 aaKnown RBP18.15■□□□□ 0.5
SYNE4-202ENST00000340477 CENPKQ9BS16 269 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 REXO4Q9GZR2 422 aaKnown RBP18.15■□□□□ 0.5
SYNE4-202ENST00000340477 RHBGQ9H310 441 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 IPPKQ9H8X2 491 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 ZNF71Q9NQZ8 489 aaPredicted RBP18.15■□□□□ 0.5
SYNE4-202ENST00000340477 GPR83Q9NYM4 423 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 DCDC2Q9UHG0 476 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 TP53TG5Q9Y2B4 290 aa18.15■□□□□ 0.5
SYNE4-202ENST00000340477 A6NL46 340 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 GLRA3O75311 464 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 ALOX12BO75342 701 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 SIX3O95343 332 aaPredicted RBP18.14■□□□□ 0.49
SYNE4-202ENST00000340477 C8orf89P0DMQ9 161 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 RNH1P13489 461 aaKnown RBP18.14■□□□□ 0.49
SYNE4-202ENST00000340477 ITGA3P26006 1051 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 RASA2Q15283 850 aa18.14■□□□□ 0.49
SYNE4-202ENST00000340477 KIRREL2Q6UWL6 708 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms