RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 HECTD3Q5T447 861 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 NEK10Q6ZWH5 1172 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 OR10G2Q8NGC3 310 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 HCAR2Q8TDS4 363 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 TESCQ96BS2 214 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 TRMT61AQ96FX7 289 aaKnown RBP11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 MED8Q96G25 268 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 IL4I1Q96RQ9 567 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 PITX2Q99697 317 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 DDX28Q9NUL7 540 aaKnown RBP11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 SH3BP4Q9P0V3 963 aa11.51□□□□□ -0.57
CCDC144CP-201ENST00000340196 OR2AG2A6NM03 316 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CLCA1A8K7I4 914 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 GABRR3A8MPY1 467 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ICMTO60725 284 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 RPLP0P05388 317 aaKnown RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 GPX2P18283 190 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 LHCGRP22888 699 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 S100A5P33763 92 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 MXD1Q05195 221 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CDC20Q12834 499 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ZNF385BQ569K4 471 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CERS6Q6ZMG9 384 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 C1orf52Q8N6N3 182 aaKnown RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 NATD1Q8N6N6 113 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 IL17RDQ8NFM7 739 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 TP53INP1Q96A56 240 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 TTYH2Q9BSA4 534 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 SP140LQ9H930 580 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CCNB1IP1Q9NPC3 277 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ADPRHL2Q9NX46 363 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ASIC5Q9NY37 505 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 MUTYHQ9UIF7 546 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 TMPRSS11EQ9UL52 423 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ZSCAN5BA6NJL1 495 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 H3BQ06 376 aaPredicted RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CDK2AP1O14519 115 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 SUV39H1O43463 412 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 DYRK3O43781 588 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 SOX14O95416 240 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 FHP07954 510 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 GGT2P36268 569 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 SMAD3P84022 425 aaKnown RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 BCL2L1Q07817 233 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ELP6Q0PNE2 266 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CDKN3Q16667 212 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 PUS10Q3MIT2 529 aaKnown RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 TTLL9Q3SXZ7 439 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 INO80DQ53TQ3 878 aaPredicted RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 SLC44A2Q8IWA5 706 aaPredicted RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 MMP21Q8N119 569 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 LGI4Q8N135 537 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ESX1Q8N693 406 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 SCAMP4Q969E2 229 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 MED30Q96HR3 178 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 NECTIN4Q96NY8 510 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 TCF25Q9BQ70 676 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 PRRG3Q9BZD7 231 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 NUAK2Q9H093 628 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ELAC1Q9H777 363 aaKnown RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 SPASTQ9UBP0 616 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CLEC2DQ9UHP7 191 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 RPS6KA6Q9UK32 745 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 TBC1D24Q9ULP9 559 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 TET1Q8NFU7 2136 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 HAT1O14929 419 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CRYZL1O95825 349 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 PRPS2P11908 318 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ZNF181Q2M3W8 571 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 XKR6Q5GH73 641 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 DGKKQ5KSL6 1271 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ATAD3CQ5T2N8 411 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 PAQR6Q6TCH4 344 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 GALNT13Q8IUC8 556 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 BBS7Q8IWZ6 715 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 SYNPOQ8N3V7 929 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 UBTD2Q8WUN7 234 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CIDECQ96AQ7 238 aaPredicted RBP11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CMTM7Q96FZ5 175 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 DUSP26Q9BV47 211 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 CNPPD1Q9BV87 410 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 MMP28Q9H239 520 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 C11orf16Q9NQ32 467 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 DUSP12Q9UNI6 340 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 ERVW-1Q9UQF0 538 aa11.5□□□□□ -0.57
CCDC144CP-201ENST00000340196 TMEM189-UBE2V1I3L0A0 370 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 SYN3O14994 580 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 GPX5O75715 221 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 HMGA1P17096 107 aaKnown RBP11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 RPS3P23396 243 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 DAB2P98082 770 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 IRF8Q02556 426 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 ABRQ12979 859 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 SLAMF1Q13291 335 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 COL9A2Q14055 689 aaPredicted RBP11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 TBCEQ15813 527 aaPredicted RBP11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 LRRC26Q2I0M4 334 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 TCTN1Q2MV58 587 aa11.49□□□□□ -0.57
CCDC144CP-201ENST00000340196 POM121L1PQ3SYA9 428 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms