RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 COX20Q5RI15 118 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 SYT6Q5T7P8 510 aaPredicted RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 VASH1Q7L8A9 365 aaPredicted RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 ZSWIM9Q86XI8 627 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 FAM9CQ8IZT9 166 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 ASCC1Q8N9N2 400 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 MINDY2Q8NBR6 621 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CSGALNACT1Q8TDX6 532 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 C17orf50Q8WW18 174 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 SORBS1Q9BX66 1292 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 DRGXA6NNA5 263 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 RTCAO00442 366 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CASKO14936 926 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 SLC16A6O15403 523 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 ADORA3P0DMS8 318 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 TNFSF8P32971 234 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 GSTM5P46439 218 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 TUFMP49411 452 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 RGS6P49758 472 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 HNRNPA0Q13151 305 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 IL18Q14116 193 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 ASB18Q6ZVZ8 466 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 EXOSC8Q96B26 276 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 WRAP53Q9BUR4 548 aaKnown RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 DUSP21Q9H596 190 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
PCDH8-201ENST00000338862 IL20RAQ9UHF4 553 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 CLEC2DQ9UHP7 191 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 GABRQQ9UN88 632 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 N6AMT1Q9Y5N5 214 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 MIA3Q5JRA6 1907 aa13.63□□□□□ -0.23
PCDH8-201ENST00000338862 FAM240BA0A1B0GVZ2 78 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 SMLR1H3BR10 107 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 ACVR1Q04771 509 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 SRSF11Q05519 484 aaKnown RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 DOC2AQ14183 400 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 NCF4Q15080 339 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 GCNT6Q5T4J0 391 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 Q6ZVU0 165 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 USP45Q70EL2 814 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 LAX1Q8IWV1 398 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 TMEM184CQ9NVA4 438 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 QPCTLQ9NXS2 382 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CFAP97Q9P2B7 532 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 PCDHGA6Q9Y5G7 932 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 BPTFQ12830 3046 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 OR2A25A4D2G3 310 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 KPNA3O00505 521 aaPredicted RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 ACRV1P26436 265 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 RNF144AP50876 292 aaPredicted RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CLCN4P51793 760 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 MLLT1Q03111 559 aaPredicted RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 QPRTQ15274 297 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF284Q2VY69 593 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CD300LGQ6UXG3 332 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 KRT74Q7RTS7 529 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 BEX1Q9HBH7 125 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 SLC9A8Q9Y2E8 581 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 GABRR3A8MPY1 467 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 FADS2P1A8MWK0 482 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 WBP4O75554 376 aaKnown RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 ERAL1O75616 437 aaKnown RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 BCHEP06276 602 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CCND3P30281 292 aaPredicted RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CTSOP43234 321 aaPredicted RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 TUBA1BP68363 451 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CCSMST1Q4G0I0 132 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 ATAD3CQ5T2N8 411 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 GPRC6AQ5T6X5 926 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 SDE2Q6IQ49 451 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 ERICH5Q6P6B1 374 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 TUBA1AQ71U36 451 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 TRIM69Q86WT6 500 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 SCLYQ96I15 445 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CNDP2Q96KP4 475 aaKnown RBP13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CPNE5Q9HCH3 593 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 KLHL1Q9NR64 748 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 PLAGL1Q9UM63 463 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 CARD8Q9Y2G2 431 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 AP3M1Q9Y2T2 418 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 GPSM3Q9Y4H4 160 aa13.62□□□□□ -0.23
PCDH8-201ENST00000338862 MEN1O00255 615 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 LRRTM2O43300 516 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 IFNW1P05000 195 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CD6P30203 668 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 BUD31P41223 144 aaPredicted RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 TAS2R50P59544 299 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 UGT8Q16880 541 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 LRRC26Q2I0M4 334 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 ZNF181Q2M3W8 571 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 KDM4DQ6B0I6 523 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 NCEH1Q6PIU2 408 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 PAQR6Q6TCH4 344 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 THOC6Q86W42 341 aaKnown RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 KRT73Q86Y46 540 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 MMAAQ8IVH4 418 aaKnown RBP13.61□□□□□ -0.23
PCDH8-201ENST00000338862 NPAS3Q8IXF0 933 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 TIGD4Q8IY51 512 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 CFAP206Q8IYR0 622 aa13.61□□□□□ -0.23
PCDH8-201ENST00000338862 PEX13Q92968 403 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms