RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 E7ESA3 106 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 SLC35G6P0C7Q6 338 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 SMIM10L1P0DMW3 83 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 NCF1P14598 390 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 ZNF37AP17032 561 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 AP1S2P56377 157 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 OR4D2P58180 307 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 ABRAXAS2Q15018 415 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 TSNQ15631 228 aaKnown RBP12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 ACER2Q5QJU3 275 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 ZNF468Q5VIY5 522 aaPredicted RBP12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 CRYBG3Q68DQ2 2970 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 PLAG1Q6DJT9 500 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 SPINK14Q6IE38 97 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 H3F3CQ6NXT2 135 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 ZBED8Q8IZ13 594 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 NT5CQ8TCD5 201 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 CREB3L4Q8TEY5 395 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 NR4A3Q92570 626 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 LRRC39Q96DD0 335 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 SMIM10Q96HG1 83 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 PTCHD1Q96NR3 888 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 EGFL8Q99944 293 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 SARGQ9BW04 601 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 CDCP1Q9H5V8 836 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 KLHL1Q9NR64 748 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 ZFP69BQ9UJL9 534 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 DYRK1BQ9Y463 629 aa12.57□□□□□ -0.4
NUDCD3-201ENST00000338427 MYOCOSA0A1B0GUC4 107 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 PCDH17O14917 1159 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 TAPBPO15533 448 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 PHGDHO43175 533 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 PRAMEF4O60810 478 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 PRAMEF2O60811 474 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 FAM155BO75949 473 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 FHP07954 510 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 PAFAH1B1P43034 410 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 KCNC1P48547 511 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 REEP5Q00765 189 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 PWP1Q13610 501 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 TUBA3CQ13748 450 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 RUNX2Q13950 521 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 HERC3Q15034 1050 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 ZNF766Q5HY98 468 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 TOR1AIP1Q5JTV8 583 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 PRAMEF9Q5VWM5 478 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 TUBA3EQ6PEY2 450 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 GFRALQ6UXV0 394 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 TMPRSS11BQ86T26 416 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 NKAPQ8N5F7 415 aaKnown RBP12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 M1APQ8TC57 530 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 ATL1Q8WXF7 558 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 TBC1D20Q96BZ9 403 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 ZNF354BQ96LW1 612 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 MCMBPQ9BTE3 642 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 TSPAN10Q9H1Z9 355 aaPredicted RBP12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 SAYSD1Q9NPB0 183 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 NECTIN3Q9NQS3 549 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 CTNNAL1Q9UBT7 734 aa12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 CORO1CQ9ULV4 474 aaPredicted RBP12.56□□□□□ -0.4
NUDCD3-201ENST00000338427 NOTCH2Q04721 2471 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 CPAMD8Q8IZJ3 1885 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 PABPN1LA6NDY0 278 aaKnown RBP12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 MAGEB17A8MXT2 336 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 CCDC188H7C350 402 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 RAD51CO43502 376 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 UNC5CO95185 931 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 RASAL1O95294 804 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 STSP08842 583 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 ENO2P09104 434 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 MAOAP21397 527 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 SLC26A5P58743 744 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 BTN3A2P78410 334 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 C2orf54Q08AI8 447 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 FRG1Q14331 258 aaKnown RBP12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 USP10Q14694 798 aaKnown RBP12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 ADNP2Q6IQ32 1131 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 SLCO4C1Q6ZQN7 724 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 SREK1Q8WXA9 508 aaKnown RBP12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 RHBDF1Q96CC6 855 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 VPS39Q96JC1 886 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 PDLIM2Q96JY6 352 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 SLC6A16Q9GZN6 736 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 PELI2Q9HAT8 420 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 GPAMQ9HCL2 828 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 C19orf25Q9UFG5 118 aaPredicted RBP12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 SH3BGRL2Q9UJC5 107 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 OARD1Q9Y530 152 aa12.55□□□□□ -0.4
NUDCD3-201ENST00000338427 TRGV8A0A0C4DH27 118 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 WDR47O94967 919 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 WISP3O95389 354 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 TBX6O95947 436 aaPredicted RBP12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 C1GALT1C1LP0DN25 315 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 AHRP35869 848 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 AGTR2P50052 363 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 HNRNPFP52597 415 aaKnown RBP12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 GPX6P59796 221 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 RGS1Q08116 209 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 OR4D1Q15615 310 aa12.54□□□□□ -0.4
NUDCD3-201ENST00000338427 OR1C1Q15619 314 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms