RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ARHGEF33A8MVX0 844 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 RFXAPO00287 272 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 CACNG3O60359 315 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 PRKRAO75569 313 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 PIM1P11309 404 aaPredicted RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 PRPS2P11908 318 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 SPINT3P49223 89 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 PRMT2P55345 433 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TBPL1P62380 186 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 PHC1P78364 1004 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 CDK5R2Q13319 367 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TSTQ16762 297 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 CTU2Q2VPK5 515 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 C17orf64Q86WR6 236 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TRIM48Q8IWZ4 208 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 OR4N5Q8IXE1 308 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 CHDHQ8NE62 594 aaPredicted RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 OR14C36Q8NHC7 312 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 CSGALNACT1Q8TDX6 532 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 CXorf40AQ8TE69 158 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 SCRN2Q96FV2 425 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 PKMYT1Q99640 499 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 QRSL1Q9H0R6 528 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 ZNF385DQ9H6B1 395 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 ZCCHC3Q9NUD5 404 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 MS4A12Q9NXJ0 267 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 FBXO10Q9UK96 956 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 RUVBL1Q9Y265 456 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 PLXNA1Q9UIW2 1896 aa7.93□□□□□ -1.14
HPS4-201ENST00000336873 TPRP12270 2363 aaKnown RBP7.93□□□□□ -1.14
HPS4-201ENST00000336873 IGLV3-10A0A075B6K4 115 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 A0A1B0GVC2 190 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 A6NIN4 97 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 K7ESM1 405 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 TLX2O43763 284 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 PSIP1O75475 530 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 CCNDBP1O95273 360 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 BMP10O95393 424 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 C9P02748 559 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 IL3P08700 152 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 CRHBPP24387 322 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 NOS3P29474 1203 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SOX6P35712 828 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 CDK6Q00534 326 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SKIV2LQ15477 1246 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 SNAPC1Q16533 368 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 DUOXA1Q1HG43 343 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 EXOC3L2Q2M3D2 409 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ZNF829Q3KNS6 432 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 GPR33Q49SQ1 333 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 TCEAL5Q5H9L2 206 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 TRIM40Q6P9F5 258 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 POMZP3Q6PJE2 187 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 IGFN1Q86VF2 1251 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 IQCHQ86VS3 1027 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 AMER2Q8N7J2 671 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 TCEANCQ8N8B7 351 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 GLB1L3Q8NCI6 653 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 OR7G3Q8NG95 312 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 OR5D16Q8NGK9 328 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SMG7Q92540 1137 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 TRIB3Q96RU7 358 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 COQ7Q99807 217 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 OR51E2Q9H255 320 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ACTL8Q9H568 366 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ZDBF2Q9HCK1 2354 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 PCP4L1A6NKN8 68 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 WASH4PA8MWX3 477 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 FAM25AB3EWG3 89 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 FAM25CB3EWG5 89 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 FAM25GB3EWG6 89 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 WNT9AO14904 365 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SGTAO43765 313 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 HYAL3O43820 417 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 TSPAN19P0C672 248 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 S100A1P23297 94 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SSTR4P31391 388 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 DNAJA1P31689 397 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 IFNA8P32881 189 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 MAPK8P45983 427 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 VEGFBP49765 207 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 EMP3P54852 163 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SRP54P61011 504 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 TUBA4AP68366 448 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 SGCGQ13326 291 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 CLCA4Q14CN2 919 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 COX20Q5RI15 118 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 CCDC116Q8IYX3 515 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 Q8N9G6 341 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 SLC43A3Q8NBI5 491 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ZNF548Q8NEK5 533 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 WDR48Q8TAF3 677 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 TFGQ92734 400 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 RAD51AP1Q96B01 352 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 C12orf66Q96MD2 445 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 KLF16Q9BXK1 252 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 RBM38Q9H0Z9 239 aaKnown RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 CCDC177Q9NQR7 707 aaPredicted RBP7.92□□□□□ -1.14
HPS4-201ENST00000336873 TM7SF3Q9NS93 570 aa7.92□□□□□ -1.14
HPS4-201ENST00000336873 ATAD3AQ9NVI7 634 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms