RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 RFLNAQ6ZTI6 216 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PTCHD4Q6ZW05 846 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SYT13Q7L8C5 426 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 LIX1Q8N485 282 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 FAM129BQ96TA1 746 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CGREF1Q99674 301 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 DCSTAMPQ9H295 470 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CLN6Q9NWW5 311 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SNTNA6NMZ2 147 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CDC7O00311 574 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CBSLP0DN79 551 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CBSP35520 551 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PPP4R4Q6NUP7 873 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 TMEM126BQ8IUX1 230 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SLC15A4Q8N697 577 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SERHL2Q9H4I8 314 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 TFB2MQ9H5Q4 396 aaKnown RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SERHLQ9NQF3 203 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 INTS7Q9NVH2 962 aaKnown RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 TBCCD1Q9NVR7 557 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 MAP10Q9P2G4 905 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CA5BQ9Y2D0 317 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 AP3M1Q9Y2T2 418 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 A0A1W2PP18 115 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 G3V2L1 256 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 H0YC42 278 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SLC28A1O00337 649 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PI15O43692 258 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PORP16435 677 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 FEN1P39748 380 aaKnown RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 HNF4AP41235 474 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 NKX2-5P52952 324 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PRKAG1P54619 331 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 ERVK-8P63133 956 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PLEKHS1Q5SXH7 462 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SULT1C3Q6IMI6 304 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 NIPAL1Q6NVV3 410 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF655Q8N720 491 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF614Q8N883 585 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 AVL9Q8NBF6 648 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 C1GALT1C1Q96EU7 318 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 RPF2Q9H7B2 306 aaKnown RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CCM2LQ9NUG4 571 aaPredicted RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 TANC1Q9C0D5 1861 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 FUOMA2VDF0 154 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 ANHXE9PGG2 379 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 OR10H3O60404 316 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PRLP01236 227 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 SYPP08247 313 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 EPORP19235 508 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 FCARP24071 287 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 MAGEA8P43361 318 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 PTSQ03393 145 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 KCNAB2Q13303 367 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CYP20A1Q6UW02 462 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 TMPRSS11BQ86T26 416 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 RAB43Q86YS6 212 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 DEPDC4Q8N2C3 294 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 GFM1Q96RP9 751 aaKnown RBP11.38□□□□□ -0.59
HDAC6-201ENST00000334136 FAIMQ9NVQ4 179 aa11.38□□□□□ -0.59
HDAC6-201ENST00000334136 CXorf51AA0A1B0GTR3 108 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 GPR39O43194 453 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 ABCB7O75027 752 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 CCNDBP1O95273 360 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 PEX11BO96011 259 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 CDH1P12830 882 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 SKP1P63208 163 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 CDK3Q00526 305 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 RELAQ04206 551 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 COX10Q12887 443 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 THOC7Q6I9Y2 204 aaKnown RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 SFTPA1Q8IWL2 248 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 OR13J1Q8NGT2 312 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 NELL1Q92832 810 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 CLEC4MQ9H2X3 399 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 A8MV72 311 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 BMXP51813 675 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 ADPRHP54922 357 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 AP1S2P56377 157 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 EEFSECP57772 596 aaKnown RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 SLC13A2Q13183 592 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 WSCD2Q2TBF2 565 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 FAM91A1Q658Y4 838 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 FAM160A2Q8N612 972 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 ACVR1CQ8NER5 493 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 ZNF420Q8TAQ5 688 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 RERGQ96A58 199 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 MRGPRX3Q96LB0 322 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 NECAB3Q96P71 396 aaPredicted RBP11.37□□□□□ -0.59
HDAC6-201ENST00000334136 RAB11FIP5Q9BXF6 653 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 TREX1Q9NSU2 369 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 TMEM9Q9P0T7 183 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 LOC100130705A0A1B0GUX0 176 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 FAM240BA0A1B0GVZ2 78 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 FAM234BA2RU67 622 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 SAGE2PA6NJ88 616 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 SLC22A1O15245 554 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 LATO43561 262 aa11.37□□□□□ -0.59
HDAC6-201ENST00000334136 POU3F3P20264 500 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms