RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SPATA31D1Q6ZQQ2 1576 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 A0A1B0GVI7 797 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 MPZL2O60487 215 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 L1CAMP32004 1257 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 PXNP49023 591 aaPredicted RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 PLP2Q04941 152 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 WSCD2Q2TBF2 565 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 SH3D19Q5HYK7 790 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 C12orf40Q86WS4 652 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 BPIFB1Q8TDL5 484 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 SLC25A44Q96H78 314 aaPredicted RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 WASF3Q9UPY6 502 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 FAM170BA6NMN3 283 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 CDRT1O95170 752 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 PRKACGP22612 351 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 STK19P49842 368 aaPredicted RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 YBEYP58557 167 aaPredicted RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 LGI4Q8N135 537 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 LRRC20Q8TCA0 184 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 RDH12Q96NR8 316 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 APOBEC3GQ9HC16 384 aaKnown RBP10.24□□□□□ -0.77
CLN8-201ENST00000331222 TDP1Q9NUW8 608 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 DTLQ9NZJ0 730 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 FLRT1Q9NZU1 646 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 ATXN10Q9UBB4 475 aa10.24□□□□□ -0.77
CLN8-201ENST00000331222 A0A0A6YYH2 397 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 A6NJ64 397 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 LAMTOR5O43504 91 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 PPM1BO75688 479 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 HTR1AP08908 422 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 ZNF12P17014 697 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 PDSS1Q5T2R2 415 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 AP1S3Q96PC3 154 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 Q9N2J8 555 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 A0A0U1RQK1 487 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 ORC5O43913 435 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 FBLP22087 321 aaKnown RBP10.23□□□□□ -0.77
CLN8-201ENST00000331222 ASPAP45381 313 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 NIPAL4Q0D2K0 466 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 STK11Q15831 433 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 MYLK3Q32MK0 819 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 CENPSQ8N2Z9 138 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 WDR20Q8TBZ3 569 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 LRRC58Q96CX6 371 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 TMEM74Q96NL1 305 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 CD180Q99467 661 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 NUSAP1Q9BXS6 441 aaKnown RBP10.23□□□□□ -0.77
CLN8-201ENST00000331222 OR10A4Q9H209 315 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 OR51I1Q9H343 314 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 NUDT15Q9NV35 164 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 OR1A2Q9Y585 309 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 RIMBP3CA6NJZ7 1639 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 RIMBP3BA6NNM3 1639 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 RIMBP3Q9UFD9 1639 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 TULP2O00295 520 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 COQ9O75208 318 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 PVALBP20472 110 aaPredicted RBP10.23□□□□□ -0.77
CLN8-201ENST00000331222 CCNHP51946 323 aaPredicted RBP10.23□□□□□ -0.77
CLN8-201ENST00000331222 CNKSR3Q6P9H4 555 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 CLEC20AQ6ZU45 233 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 GALNT15Q8N3T1 639 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 VGLL2Q8N8G2 317 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 AASSQ9UDR5 926 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 KCTD3Q9Y597 815 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 CLDN25C9JDP6 229 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 ABLIM1O14639 778 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 EI24O14681 340 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 SHOXO15266 292 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 MPPED1O15442 326 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 OR12D1P0DN82 309 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 LBX1P52954 281 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 CDH15P55291 814 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 GOLGA7Q7Z5G4 137 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 GALNT12Q8IXK2 581 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 POLE4Q9NR33 117 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 RCOR3Q9P2K3 495 aaPredicted RBP10.23□□□□□ -0.77
CLN8-201ENST00000331222 GALPQ9UBC7 116 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 ZDHHC2Q9UIJ5 367 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 TEX13CA0A0J9YWL9 993 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 FAM155AB1AL88 458 aaPredicted RBP10.23□□□□□ -0.77
CLN8-201ENST00000331222 GABBR2O75899 941 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 ADAP00813 363 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 CTBP2P56545 445 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 RPL19P84098 196 aaKnown RBP10.23□□□□□ -0.77
CLN8-201ENST00000331222 PON2Q15165 354 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 FIGNL1Q6PIW4 674 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 LRFN4Q6PJG9 635 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
CLN8-201ENST00000331222 LRRC46Q96FV0 321 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 CMTM7Q96FZ5 175 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 PTCHD1Q96NR3 888 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 TRMOQ9BU70 441 aa10.23□□□□□ -0.77
CLN8-201ENST00000331222 ISPDA4D126 451 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 LEFTY2O00292 366 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 HMGB3O15347 200 aaKnown RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 H1F0P07305 194 aaKnown RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 BMP1P13497 986 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 NAA10P41227 235 aaPredicted RBP10.22□□□□□ -0.77
CLN8-201ENST00000331222 PMS2P3Q13401 168 aa10.22□□□□□ -0.77
CLN8-201ENST00000331222 LY6G5CQ5SRR4 150 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms