RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 DOK1Q99704 481 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 SARGQ9BW04 601 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 ACAT2Q9BWD1 397 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 SPNS1Q9H2V7 528 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 CAPN10Q9HC96 672 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 C11orf16Q9NQ32 467 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 PNPLA3Q9NST1 481 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 CUEDC1Q9NWM3 386 aaPredicted RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 RIMS3Q9UJD0 308 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 PPT2Q9UMR5 302 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 MYRFQ9Y2G1 1151 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 AP4S1Q9Y587 144 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 ENTPD2Q9Y5L3 495 aa12.23□□□□□ -0.45
DDX39A-202ENST00000324340 COPG1Q9Y678 874 aaKnown RBP12.23□□□□□ -0.45
DDX39A-202ENST00000324340 A0A1B0GTQ1 180 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 H3BSA7 217 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 SDC3O75056 442 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 FKBP9O95302 570 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 ACPPP15309 386 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 ITGAXP20702 1163 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 CMPK1P30085 196 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 SERPINB1P30740 379 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 PIK3CBP42338 1070 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 TMED10P49755 219 aaKnown RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 MAZP56270 477 aaKnown RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 RPS3AP61247 264 aaKnown RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 CSNK1G2P78368 415 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 EMX2Q04743 252 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 KLF10Q13118 480 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 SQLEQ14534 574 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 KIAA0040Q15053 153 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 PLCL1Q15111 1095 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 NR6A1Q15406 480 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 AP5B1Q2VPB7 878 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 SGO1Q5FBB7 561 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 C6orf132Q5T0Z8 1188 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 THOC7Q6I9Y2 204 aaKnown RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 ZNF425Q6IV72 752 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 SLC23A3Q6PIS1 610 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 TMIGD1Q6UXZ0 262 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 LINC00299Q6ZSB3 139 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 ZFAND4Q86XD8 727 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 METTL2AQ96IZ6 378 aaKnown RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 OR2A14Q96R47 310 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 PRPF18Q99633 342 aaKnown RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 AIF1LQ9BQI0 150 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 BRINP2Q9C0B6 783 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 RHBGQ9H310 441 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 SLC6A20Q9NP91 592 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 MRPS30Q9NP92 439 aaKnown RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 C8orf4Q9NR00 106 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 SDR39U1Q9NRG7 319 aaPredicted RBP12.22□□□□□ -0.45
DDX39A-202ENST00000324340 TMEM184CQ9NVA4 438 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 C1orf109Q9NX04 203 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 ASIC5Q9NY37 505 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 GIMAP2Q9UG22 337 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 ADGRE2Q9UHX3 823 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 KLK4Q9Y5K2 254 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 PCDH15Q96QU1 1955 aa12.22□□□□□ -0.45
DDX39A-202ENST00000324340 A0A087WXM4 84 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 PRSS51A0A1B0GVH4 220 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 LILRA5A6NI73 299 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 ISM1B1AKI9 464 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-202ENST00000324340 H3BNH8 94 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 H7BY64 318 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 PPM1DO15297 605 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 YKT6O15498 198 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 TNFSF14O43557 240 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 GALR2O43603 387 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-202ENST00000324340 EPHA8P29322 1005 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-202ENST00000324340 HMGCS1Q01581 520 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 MEF2AQ02078 507 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-202ENST00000324340 BNIP3Q12983 259 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 MAD2L1Q13257 205 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-202ENST00000324340 HERC3Q15034 1050 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 SF1Q15637 639 aaKnown RBP12.21□□□□□ -0.45
DDX39A-202ENST00000324340 MOGQ16653 247 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 IMPG1Q17R60 797 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 DEFB133Q30KQ1 61 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 C14orf28Q4W4Y0 310 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 RFTN2Q52LD8 501 aaPredicted RBP12.21□□□□□ -0.45
DDX39A-202ENST00000324340 DCDC5Q6ZRR9 648 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 ZNF740Q8NDX6 193 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 TNIP2Q8NFZ5 429 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 HUS1BQ8NHY5 278 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 MTFMTQ96DP5 389 aaKnown RBP12.21□□□□□ -0.45
DDX39A-202ENST00000324340 CMTM7Q96FZ5 175 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 LOXL4Q96JB6 756 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 FCRL1Q96LA6 429 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 ZNF597Q96LX8 424 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 PRAP1Q96NZ9 151 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 LRTM1Q9HBL6 345 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 AIG1Q9NVV5 245 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 TMEM45AQ9NWC5 275 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 ACTR10Q9NZ32 417 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 ANKMY1Q9P2S6 941 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 GPR45Q9Y5Y3 372 aa12.21□□□□□ -0.45
DDX39A-202ENST00000324340 TRBC2A0A5B9 178 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms