RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 B4DXG7 233 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 ITGALP20701 1170 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 PSMA1P25786 263 aaKnown RBP17.21■□□□□ 0.35
PRKCB-202ENST00000321728 PDZK1Q5T2W1 519 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 FRG2Q64ET8 278 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 ZNF598Q86UK7 904 aaKnown RBP17.21■□□□□ 0.35
PRKCB-202ENST00000321728 C11orf74Q86VG3 221 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 NAGSQ8N159 534 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 CACTIN-AS1Q8N1I8 211 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 CAMKK1Q8N5S9 505 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 SNAPC3Q92966 411 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 FRG2BQ96QU4 278 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 SEPT5Q99719 369 aaPredicted RBP17.21■□□□□ 0.35
PRKCB-202ENST00000321728 STMN3Q9NZ72 180 aa17.21■□□□□ 0.35
PRKCB-202ENST00000321728 CHD5Q8TDI0 1954 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-202ENST00000321728 ARHGEF9O43307 516 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 TMCC2O75069 709 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 SCG5P05408 212 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 ACPPP15309 386 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 C19orf57Q0VDD7 668 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 ZNF177Q13360 481 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-202ENST00000321728 ASAH1Q13510 395 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 DDX39BQ13838 428 aaKnown RBP17.2■□□□□ 0.34
PRKCB-202ENST00000321728 RGNQ15493 299 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 C5orf22Q49AR2 442 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 PAMR1Q6UXH9 720 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 C16orf59Q7L2K0 433 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 GPR155Q7Z3F1 870 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 SLC34A3Q8N130 599 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 TP53I13Q8NBR0 393 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-202ENST00000321728 C11orf65Q8NCR3 313 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 OR4C15Q8NGM1 316 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 FAM129BQ96TA1 746 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 TCF25Q9BQ70 676 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 DUSP26Q9BV47 211 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 RNF121Q9H920 327 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 CNOT2Q9NZN8 540 aaKnown RBP17.2■□□□□ 0.34
PRKCB-202ENST00000321728 PLXNA3P51805 1871 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 KCNE1BA0A087WTH5 132 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 A0A0X1KG70 313 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 H3BNC9 293 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 J3KTA2 159 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 PCDH17O14917 1159 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 PCDH7O60245 1069 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 ZNF623O75123 536 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 TRBC1P01850 177 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 PRPH2P23942 346 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 CRATP43155 626 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 MAP2K5Q13163 448 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 IFI44LQ53G44 452 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 RNF219Q5W0B1 726 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-202ENST00000321728 NCEH1Q6PIU2 408 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 DENND1CQ8IV53 801 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 SLC44A2Q8IWA5 706 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-202ENST00000321728 REM2Q8IYK8 340 aaPredicted RBP17.2■□□□□ 0.34
PRKCB-202ENST00000321728 OR5H6Q8NGV6 325 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 ANGPTL6Q8NI99 470 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 VPS35Q96QK1 796 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 IL4I1Q96RQ9 567 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 ABCB9Q9NP78 766 aa17.2■□□□□ 0.34
PRKCB-202ENST00000321728 A0A0B4J293 547 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 SH3D21A4FU49 640 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 FABP12A6NFH5 140 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 WWP2O00308 870 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 GCM2O75603 506 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 CYP17A1P05093 508 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 ITPKAP23677 461 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 MLLT3P42568 568 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 VEPH1Q14D04 833 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 FAM110CQ1W6H9 321 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 ATXN7L2Q5T6C5 722 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 HOMEZQ8IX15 550 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 PEX5LQ8IYB4 626 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 RDH10Q8IZV5 341 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 OR8J2Q8NGG1 315 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 ENKURQ8TC29 256 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 RNF31Q96EP0 1072 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 DIRAS2Q96HU8 199 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 NECTIN4Q96NY8 510 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 TTLL2Q9BWV7 592 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 RERGLQ9H628 205 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 CLEC2DQ9UHP7 191 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 A0A0U1RQF3 1178 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 C12orf71A8MTZ7 269 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 A8MX80 341 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 GAPDHSO14556 408 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 ZNF780AO75290 641 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 SH3BGRLO75368 114 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 CCNYL3P0C7X3 344 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 PTX3P26022 381 aaPredicted RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 ACRV1P26436 265 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 CNR2P34972 360 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 PCGF2P35227 344 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 SGSHP51688 502 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 HOXC5Q00444 222 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 FAPQ12884 760 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 BOP1Q14137 746 aaKnown RBP17.19■□□□□ 0.34
PRKCB-202ENST00000321728 EFR3AQ14156 821 aa17.19■□□□□ 0.34
PRKCB-202ENST00000321728 QPRTQ15274 297 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms