RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 RIC8BQ9NVN3 520 aa20.15■□□□□ 0.82
YBX1-201ENST00000321358 PCDHGA8Q9Y5G5 932 aa20.15■□□□□ 0.82
YBX1-201ENST00000321358 SPTBN2O15020 2390 aa20.15■□□□□ 0.82
YBX1-201ENST00000321358 PIP5K1BO14986 540 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 ZNF749O43361 778 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 HYAL3O43820 417 aaPredicted RBP20.14■□□□□ 0.81
YBX1-201ENST00000321358 SH3BGRLO75368 114 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 RBMS1P29558 406 aaKnown RBP20.14■□□□□ 0.81
YBX1-201ENST00000321358 HERC3Q15034 1050 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 NIPAL1Q6NVV3 410 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 RNF175Q8N4F7 328 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 RGMAQ96B86 450 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 C19orf60Q96EN9 201 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 CHMP6Q96FZ7 201 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 F2RL3Q96RI0 385 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 CUTCQ9NTM9 273 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 PCDHB3Q9Y5E6 796 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 SLC22A7Q9Y694 548 aa20.14■□□□□ 0.81
YBX1-201ENST00000321358 ERI3O43414 337 aaKnown RBP20.13■□□□□ 0.81
YBX1-201ENST00000321358 CTSBP07858 339 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 TROVE2P10155 538 aaKnown RBP eCLIP20.13■□□□□ 0.81
YBX1-201ENST00000321358 ALAS2P22557 587 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 LSP1P33241 339 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 PLA2G16P53816 162 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 GABREP78334 506 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 FOXK2Q01167 660 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 PWWP2BQ6NUJ5 590 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 TMEM214Q6NUQ4 689 aaKnown RBP20.13■□□□□ 0.81
YBX1-201ENST00000321358 OR2L5Q8NG80 312 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 ZCCHC10Q8TBK6 192 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 GAL3ST3Q96A11 431 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 KCNC2Q96PR1 638 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 NUF2Q9BZD4 464 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 ACPTQ9BZG2 426 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 ROGDIQ9GZN7 287 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 ACTR5Q9H9F9 607 aaPredicted RBP20.13■□□□□ 0.81
YBX1-201ENST00000321358 ANKHQ9HCJ1 492 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 FGFR1OP2Q9NVK5 253 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 NDOR1Q9UHB4 597 aa20.13■□□□□ 0.81
YBX1-201ENST00000321358 VPS4BO75351 444 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 SEMA3DO95025 777 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 TNFSF15O95150 251 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 ALOX12P18054 663 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 ETV5P41161 510 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 HMGCS1Q01581 520 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 FAM53BQ14153 422 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 NR6A1Q15406 480 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 AP5B1Q2VPB7 878 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 ADPRMQ3LIE5 342 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 TTLL10Q6ZVT0 673 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 MARCH9Q86YJ5 346 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 MS4A6EQ96DS6 147 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 CLIP3Q96DZ5 547 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 TRIM55Q9BYV6 548 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 ULBP3Q9BZM4 244 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 TUBB1Q9H4B7 451 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 COPS7BQ9H9Q2 264 aaPredicted RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 CDC14AQ9UNH5 594 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 PCDHGA3Q9Y5H0 932 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 HEATR5BQ9P2D3 2071 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 NCOR2Q9Y618 2525 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 H3BMH7 237 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 SAP18O00422 153 aaKnown RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 CPNE3O75131 537 aaKnown RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 SNRNP200O75643 2136 aaKnown RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 RSL1D1O76021 490 aaKnown RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 TGDSO95455 350 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 ZNF888P0CJ79 500 aaPredicted RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 HNRNPH1P31943 449 aaKnown RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 AVPR1BP47901 424 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 ARFIP1P53367 373 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 RAB8AP61006 207 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 BTKQ06187 659 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 HYAL2Q12891 473 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 PAGE2Q7Z2X7 111 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 LRRC34Q8IZ02 419 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 UTP15Q8TED0 518 aaKnown RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 PPP1R36Q96LQ0 422 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 PPP3R2Q96LZ3 170 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 QRFPRQ96P65 431 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 TBCDQ9BTW9 1192 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 B3GNT4Q9C0J1 378 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 NRSN2Q9GZP1 204 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 NSRP1Q9H0G5 558 aaKnown RBP20.12■□□□□ 0.81
YBX1-201ENST00000321358 KLHL31Q9H511 634 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 ADAM21Q9UKJ8 722 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 B3GALT1Q9Y5Z6 326 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 USH1CQ9Y6N9 552 aa20.12■□□□□ 0.81
YBX1-201ENST00000321358 GMNCA6NCL1 334 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 SSR2P43308 183 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 TSFMP43897 325 aaKnown RBP20.11■□□□□ 0.81
YBX1-201ENST00000321358 ACSM2AQ08AH3 577 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 SPIN4Q56A73 249 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 FAM219BQ5XKK7 198 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 ACSM2BQ68CK6 577 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 RHBDD2Q6NTF9 364 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 TUBGCP3Q96CW5 907 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 MVB12AQ96EY5 273 aa20.11■□□□□ 0.81
YBX1-201ENST00000321358 ZNF317Q96PQ6 595 aaPredicted RBP20.11■□□□□ 0.81
YBX1-201ENST00000321358 C17orf62Q9BQA9 187 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms