RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 CDC7O00311 574 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 GDF10P55107 478 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 MEP1AQ16819 746 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 LRIF1Q5T3J3 769 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 RBM12BQ8IXT5 1001 aaKnown RBP16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 C2orf15Q8WU43 125 aaKnown RBP16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 POLE4Q9NR33 117 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 CTPS2Q9NRF8 586 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 NFAT5O94916 1531 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 SLC16A8O95907 504 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 APOC3P02656 99 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 GPR33Q49SQ1 333 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 LRRC66Q68CR7 880 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 REEP3Q6NUK4 255 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 FOLH1BQ9HBA9 442 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 PCDHGC4Q9Y5F7 938 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 RGS9O75916 674 aaPredicted RBP16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 HPRP00739 348 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 IFNA5P01569 189 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 ATXN7L3Q14CW9 347 aaPredicted RBP16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 XKR5Q6UX68 686 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 PDZD9Q8IXQ8 264 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 BIRC7Q96CA5 298 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 PDZD7Q9H5P4 517 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 ALKBH4Q9NXW9 302 aa16.36■□□□□ 0.21
SMCHD1-201ENST00000320876 TREHO43280 583 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CSF2P04141 144 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CDK2P24941 298 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 POU4F2Q12837 409 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 ACBD4Q8NC06 268 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 TSSK6Q9BXA6 273 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 ZDHHC2Q9UIJ5 367 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 A0A1B0GVI7 797 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 ALDH3B2P48448 385 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 LRRC37A5PQ49AS3 106 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 ZSWIM9Q86XI8 627 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 NAT8LQ8N9F0 302 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CCDC32Q9BV29 185 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 SEC61A2Q9H9S3 476 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 ABCB8Q9NUT2 735 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 DTLQ9NZJ0 730 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 PXDNQ92626 1479 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 FUT4P22083 530 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 LIPKQ5VXJ0 399 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 ABHD15Q6UXT9 468 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 PHTF2Q8N3S3 785 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CASTOR1Q8WTX7 329 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 MRM3Q9HC36 420 aaKnown RBP16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 PAQR5Q9NXK6 330 aaPredicted RBP16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 MGAT4BQ9UQ53 548 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 SLC6A6P31641 620 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CLCNKBP51801 687 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 TAS2R50P59544 299 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CDK6Q00534 326 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 KANK2Q63ZY3 851 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 FAM43BQ6ZT52 329 aaPredicted RBP16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 BEST3Q8N1M1 668 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 MAF1Q9H063 256 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 SDHAF3Q9NRP4 125 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 KIF13AQ9H1H9 1805 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CXCL14O95715 111 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 H2AFB2P0C5Z0 115 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CXCL9Q07325 125 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 DECR1Q16698 335 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 TMEM53Q6P2H8 277 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 IRF2BP1Q8IU81 584 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 SMPDL3BQ92485 455 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF317Q96PQ6 595 aaPredicted RBP16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 SRRDQ9UH36 339 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 TLL1O43897 1013 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 CAPN15O75808 1086 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 KLK1P06870 262 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 DLSTP36957 453 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 FXYD6P3P58550 94 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 PRAMEF14Q5SWL7 426 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 PRAMEF13Q5VWM6 474 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 OR4K3Q96R72 315 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 HEPHQ9BQS7 1158 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 MIA3Q5JRA6 1907 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 MRIQ9BWK5 157 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 RNF208Q9H0X6 261 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 TIGARQ9NQ88 270 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 ZDHHC18Q9NUE0 388 aa16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 NUFIP1Q9UHK0 495 aaKnown RBP16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 FCF1Q9Y324 198 aaKnown RBP16.35■□□□□ 0.21
SMCHD1-201ENST00000320876 A0A1B0GVT2 93 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 SH3PXD2BA1X283 911 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 A8MT66 165 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ERCC1P07992 297 aaPredicted RBP16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 S1PR1P21453 382 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ANKRD13BQ86YJ7 626 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 HS3ST5Q8IZT8 346 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 FAM86B1Q8N7N1 296 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 SLC6A7Q99884 636 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 GJB1P08034 283 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ELK4P28324 431 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 SGCBQ16585 318 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 GTF2IRD2BQ6EKJ0 949 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 GTF2IRD2Q86UP8 949 aa16.34■□□□□ 0.21
SMCHD1-201ENST00000320876 ZSCAN4Q8NAM6 433 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms