RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 DLEU7Q6UYE1 221 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SLC16A12Q6ZSM3 486 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ZFAND4Q86XD8 727 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 C8orf59Q8N0T1 100 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PGBD3Q8N328 593 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 C1orf52Q8N6N3 182 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 OR4K1Q8NGD4 311 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PSMA8Q8TAA3 256 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SLC13A3Q8WWT9 602 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 DUS3LQ96G46 650 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ALPK1Q96QP1 1244 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 DPH2Q9BQC3 489 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 BRINP2Q9C0B6 783 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 TBCCD1Q9NVR7 557 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SLC25A37Q9NYZ2 338 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 C5AR2Q9P296 337 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ERVK-18Q9QC07 812 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 TAC3Q9UHF0 121 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF229Q9UJW7 825 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PSME2Q9UL46 239 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PIAS3Q9Y6X2 628 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 FAM234BA2RU67 622 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 MYO1GB0I1T2 1018 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 G3V2T6 193 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 H7BY64 318 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 YY2O15391 372 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 VPS4BO75351 444 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 PRKD3O94806 890 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 PAPLNO95428 1278 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 NADKO95544 446 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 OXSR1O95747 527 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 GPIP06744 558 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 AK4P27144 223 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 AQP1P29972 269 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CTHP32929 405 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 TAP2Q03519 686 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 GBX1Q14549 363 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 INAVAQ3KP66 663 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SOWAHCQ53LP3 525 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 Q6ZS52 159 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SYT12Q8IV01 421 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CHDHQ8NE62 594 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 OR7G3Q8NG95 312 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 RPLP0P6Q8NHW5 317 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CHPT1Q8WUD6 406 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 HMGB4Q8WW32 186 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 RLN3Q8WXF3 142 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 USP7Q93009 1102 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SLC35B4Q969S0 331 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SH3YL1Q96HL8 342 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 PPP3R2Q96LZ3 170 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 PRAP1Q96NZ9 151 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 MBOAT4Q96T53 435 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 BDH2Q9BUT1 245 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 RIBC2Q9H4K1 309 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 WDR26Q9H7D7 661 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ABCB10Q9NRK6 738 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SH3BP4Q9P0V3 963 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 LEF1Q9UJU2 399 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SNX6Q9UNH7 406 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 PCDHB14Q9Y5E9 798 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CCDC88CQ9P219 2028 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 A0A1W2PQF6 199 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 TRIM64CA6NLI5 447 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 BBIP1A8MTZ0 92 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 PDZK1P1A8MUH7 402 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ABCB7O75027 752 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CDH1P12830 882 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 NR4A2P43354 598 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 HNMTP50135 292 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 RPS14P62263 151 aaKnown RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CHRNB3Q05901 458 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 RAPSNQ13702 412 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SLBPQ14493 270 aaKnown RBP eCLIP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 RAB30Q15771 203 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 INAQ16352 499 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 SYT16Q17RD7 645 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 PDCD4Q53EL6 469 aaKnown RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 USP39Q53GS9 565 aaKnown RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 NOXRED1Q6NXP6 359 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 HACD2Q6Y1H2 254 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF621Q6ZSS3 439 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 USP51Q70EK9 711 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 TRIM46Q7Z4K8 759 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 THAP5Q7Z6K1 395 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ZDHHC13Q8IUH4 622 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 TBC1D21Q8IYX1 336 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ALDH16A1Q8IZ83 802 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CLIP4Q8N3C7 705 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 FAM160A2Q8N612 972 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 TSACCQ96A04 125 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 FAM162AQ96A26 154 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 VPS35Q96QK1 796 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 DOK1Q99704 481 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 ZDHHC5Q9C0B5 715 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 KCNK12Q9HB15 430 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 DZANK1Q9NVP4 752 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 CUEDC1Q9NWM3 386 aaPredicted RBP7.31□□□□□ -1.24
TRIM55-202ENST00000315962 FAM118AQ9NWS6 357 aa7.31□□□□□ -1.24
TRIM55-202ENST00000315962 GIN1Q9NXP7 522 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms