RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 KRT4P19013 534 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 XCR1P46094 333 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 CD97P48960 835 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 ALDH18A1P54886 795 aaKnown RBP11.39□□□□□ -0.59
SCFD1-201ENST00000311943 BTN3A2P78410 334 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 RHDQ02161 417 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 EEF1A2Q05639 463 aaKnown RBP11.39□□□□□ -0.59
SCFD1-201ENST00000311943 GTF2H2Q13888 395 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 DSG2Q14126 1118 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 GTF2H2CQ6P1K8 395 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 PARP9Q8IXQ6 854 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 CAMKVQ8NCB2 501 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 UBTD2Q8WUN7 234 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 TSLPQ969D9 159 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 MIEF2Q96C03 454 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 C17orf62Q9BQA9 187 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 CRB3Q9BUF7 120 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 NUDT9Q9BW91 350 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 SHCBP1LQ9BZQ2 653 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 TNFRSF12AQ9NP84 129 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 C3orf18Q9UK00 162 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 MKL2Q9ULH7 1088 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 POLHQ9Y253 713 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 PLAAQ9Y263 795 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 TP53TG5Q9Y2B4 290 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 CSAG2Q9Y5P2 127 aa11.39□□□□□ -0.59
SCFD1-201ENST00000311943 TLN1Q9Y490 2541 aaKnown RBP11.39□□□□□ -0.59
SCFD1-201ENST00000311943 IQANK1A0A1B0GTG1 560 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 LRIT2A6NDA9 550 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 G3V2L1 256 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 CHST10O43529 356 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 GALR3O60755 368 aaPredicted RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 PRKRAO75569 313 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 GBAP04062 536 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 SMIM10L1P0DMW3 83 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 HRH2P25021 359 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 PCBP2Q15366 365 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■■□□ 18.2
SCFD1-201ENST00000311943 MINDY4Q4G0A6 757 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 UNC50Q53HI1 259 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 MFSD4BQ5TF39 518 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 KLC3Q6P597 504 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF793Q6ZN11 406 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ATG14Q6ZNE5 492 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 LRRC70Q7Z2Q7 622 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF843Q8N446 348 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 AFAP1L2Q8N4X5 818 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 OR7G3Q8NG95 312 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 NT5CQ8TCD5 201 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 DOK4Q8TEW6 326 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 APOBEC4Q8WW27 367 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 MS4A6EQ96DS6 147 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 SMIM10Q96HG1 83 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 UBL7Q96S82 380 aaPredicted RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 DPH2Q9BQC3 489 aaPredicted RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 VN1R1Q9GZP7 353 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 MRPL46Q9H2W6 279 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 CNOT10Q9H9A5 744 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 SLC17A7Q9P2U7 560 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 RAB21Q9UL25 225 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 IGLV3-12A0A075B6K2 115 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 TGFBR3LH3BV60 316 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ERI3O43414 337 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 B4GALT2O60909 372 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 NSA2O95478 260 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 EPB42P16452 691 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ALOX12P18054 663 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 CNTFP26441 200 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 CERS1P27544 350 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 PPP2R1BP30154 601 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ARL1P40616 181 aaPredicted RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 TRAF3Q13114 568 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 FAM53BQ14153 422 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 SSPNQ14714 243 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 SGO1Q5FBB7 561 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 LETMD1Q6P1Q0 360 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 PRMT9Q6P2P2 845 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 TAOK1Q7L7X3 1001 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 TCAIMQ8N3R3 496 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 OR11G2Q8NGC1 345 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 HUS1BQ8NHY5 278 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 TRPC4APQ8TEL6 797 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ZNF473Q8WTR7 871 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 CAVIN3Q969G5 261 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 WDR34Q96EX3 536 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 PTCD3Q96EY7 689 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 KCNA7Q96RP8 456 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 CSF3RQ99062 836 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 MRPL57Q9BQC6 102 aaKnown RBP11.38□□□□□ -0.59
SCFD1-201ENST00000311943 EFHD1Q9BUP0 239 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 SLC26A1Q9H2B4 701 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ANKHQ9HCJ1 492 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 FBXL4Q9UKA2 621 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 MAP4K5Q9Y4K4 846 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 ANGPTL3Q9Y5C1 460 aa11.38□□□□□ -0.59
SCFD1-201ENST00000311943 SYCE1LA8MT33 242 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 MAGEB17A8MXT2 336 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 UBFD1O14562 309 aaKnown RBP11.37□□□□□ -0.59
SCFD1-201ENST00000311943 ITGB2P05107 769 aa11.37□□□□□ -0.59
SCFD1-201ENST00000311943 RBP1P09455 135 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms