RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 ASAH2Q9NR71 780 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 TAS2R16Q9NYV7 291 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 PCDHGB3Q9Y5G1 929 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 UGDHO60701 494 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 TIA1P31483 386 aaKnown RBP eCLIP24.34■■□□□ 1.49
HOXB3-201ENST00000311626 PPIGQ13427 754 aaKnown RBP eCLIP24.34■■□□□ 1.49
HOXB3-201ENST00000311626 GANABQ14697 944 aaKnown RBP24.34■■□□□ 1.49
HOXB3-201ENST00000311626 EXOC3L2Q2M3D2 409 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 ZNF284Q2VY69 593 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 CNKSR3Q6P9H4 555 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 KREMEN2Q8NCW0 462 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 ZNF480Q8WV37 535 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 MROQ9BYG7 248 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 SLIRPQ9GZT3 109 aaKnown RBP24.34■■□□□ 1.49
HOXB3-201ENST00000311626 GULP1Q9UBP9 304 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 BTNL2Q9UIR0 455 aa24.34■■□□□ 1.49
HOXB3-201ENST00000311626 M0R082 166 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 PLK4O00444 970 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 ACRP10323 421 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 GADD45AP24522 165 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 GRK5P34947 590 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 CLK1P49759 484 aaKnown RBP24.33■■□□□ 1.49
HOXB3-201ENST00000311626 SELENOWP63302 87 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 SLBPQ14493 270 aaKnown RBP eCLIP24.33■■□□□ 1.49
HOXB3-201ENST00000311626 HIST2H2ACQ16777 129 aaPredicted RBP24.33■■□□□ 1.49
HOXB3-201ENST00000311626 BRAT1Q6PJG6 821 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 SLCO4C1Q6ZQN7 724 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 NEK10Q6ZWH5 1172 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 ST13P5Q8NFI4 369 aaPredicted RBP24.33■■□□□ 1.49
HOXB3-201ENST00000311626 OR10G2Q8NGC3 310 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 IRF7Q92985 503 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 GLYATL1Q969I3 302 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 AP2M1Q96CW1 435 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 HRASLS5Q96KN8 279 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 EPYCQ99645 322 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 PITX2Q99697 317 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 SACM1LQ9NTJ5 587 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 SPASTQ9UBP0 616 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 ATP11BQ9Y2G3 1177 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 DENND4CQ5VZ89 1909 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 CDH23Q9H251 3354 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 PCM1Q15154 2024 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 ATG13O75143 517 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 CXCL14O95715 111 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 HOXB6P17509 224 aaKnown RBP24.33■■□□□ 1.49
HOXB3-201ENST00000311626 TBPL1P62380 186 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 MPEG1Q2M385 716 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 COMMD6Q7Z4G1 85 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 TRAM1L1Q8N609 369 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 PSMA8Q8TAA3 256 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 CEP44Q9C0F1 390 aa24.33■■□□□ 1.49
HOXB3-201ENST00000311626 SLC5A10A0PJK1 596 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 K7ESM1 405 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 FGF18O76093 207 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 STSP08842 583 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 PCGF2P35227 344 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 INAVAQ3KP66 663 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 GGHQ92820 318 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 GTPBP3Q969Y2 492 aaKnown RBP24.32■■□□□ 1.48
HOXB3-201ENST00000311626 COQ8BQ96D53 544 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 CCM2Q9BSQ5 444 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 LOC100506127A0A0U1RQW1 187 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 DBTP11182 482 aaKnown RBP24.32■■□□□ 1.48
HOXB3-201ENST00000311626 ZNF30P17039 623 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 LAG3P18627 525 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 ASMTP46597 345 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 NTHL1P78549 312 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 C2orf80Q0P641 193 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 MED27Q6P2C8 311 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 SLC39A5Q6ZMH5 540 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 RNF130Q86XS8 419 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 OR56A3Q8NH54 315 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 POP5Q969H6 163 aaKnown RBP24.32■■□□□ 1.48
HOXB3-201ENST00000311626 DCSTAMPQ9H295 470 aa24.32■■□□□ 1.48
HOXB3-201ENST00000311626 HELZP42694 1942 aaKnown RBP24.32■■□□□ 1.48
HOXB3-201ENST00000311626 PCDH17O14917 1159 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 POLR2EP19388 210 aaKnown RBP24.31■■□□□ 1.48
HOXB3-201ENST00000311626 MAGP20916 626 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 HNRNPFP52597 415 aaKnown RBP24.31■■□□□ 1.48
HOXB3-201ENST00000311626 RAB15P59190 212 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 KCNC3Q14003 757 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 CPA6Q8N4T0 437 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 ATL1Q8WXF7 558 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 YME1L1Q96TA2 773 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 MIR1-1HGQ9H1L0 117 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 EPS8L2Q9H6S3 715 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 PLAGL1Q9UM63 463 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 KCNE2Q9Y6J6 123 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 FAM227AF5H4B4 570 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 AP2A2O94973 939 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 SOAT1P35610 550 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 PRIM2P49643 509 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 SCARB2Q14108 478 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 CARTPTQ16568 116 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 ANXA8L1Q5VT79 327 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 LGI4Q8N135 537 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 MCFD2Q8NI22 146 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 ZNF296Q8WUU4 475 aaPredicted RBP24.31■■□□□ 1.48
HOXB3-201ENST00000311626 SIGLEC11Q96RL6 698 aa24.31■■□□□ 1.48
HOXB3-201ENST00000311626 CCNB1IP1Q9NPC3 277 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms