RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PRAMEF14Q5SWL7 426 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 C9orf64Q5T6V5 341 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 PRAMEF13Q5VWM6 474 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 B3GNT8Q7Z7M8 397 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 HEATR4Q86WZ0 1026 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF784Q8NCA9 323 aaPredicted RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 COQ10AQ96MF6 247 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 CSF3RQ99062 836 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 APOL4Q9BPW4 351 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 PLGRKTQ9HBL7 147 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 DMRT3Q9NQL9 472 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 RHCGQ9UBD6 479 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 SZT2Q5T011 3432 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 FEZF1A0PJY2 475 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 LINC01553A4QN01 128 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 UGT2B11O75310 529 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 SEC14L2O76054 403 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 MAGEA2P43356 314 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 EMX1Q04741 257 aaPredicted RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 CNTN1Q12860 1018 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ELAVL3Q14576 367 aaKnown RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 FAM78AQ5JUQ0 283 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 TMIGD1Q6UXZ0 262 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 MSANTD1Q6ZTZ1 278 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 P3H2Q8IVL5 708 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ALDH16A1Q8IZ83 802 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 FAM81AQ8TBF8 368 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 TFGQ92734 400 aaPredicted RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 MAGED4Q96JG8 741 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 EFCAB11Q9BUY7 163 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 RAD21L1Q9H4I0 556 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 PRDM8Q9NQV8 689 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 MARK1Q9P0L2 795 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 EXO1Q9UQ84 846 aaKnown RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 M0R129 80 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 TNFRSF11BO00300 401 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 NDUFS2O75306 463 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 HSD3B1P14060 373 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 HSD3B2P26439 372 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 NUDT6P53370 316 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 C21orf59P57076 290 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ATP1A4Q13733 1029 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 SCARB2Q14108 478 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 SPCS2Q15005 226 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 SLC5A12Q1EHB4 618 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 TNFAIP8L2Q6P589 184 aaPredicted RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ADGRD2Q7Z7M1 963 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 TERB1Q8NA31 727 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 TBC1D15Q8TC07 691 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 GANCQ8TET4 914 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 RAB2BQ8WUD1 216 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF707Q96C28 371 aaPredicted RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 IGFLR1Q9H665 355 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ATAD3AQ9NVI7 634 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF282Q9UDV7 671 aaPredicted RBP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 PSME2Q9UL46 239 aa11.08□□□□□ -0.64
PTPN2-201ENST00000309660 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.08□□□□□ -0.64
PTPN2-201ENST00000309660 DNAH14Q0VDD8 3507 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TSPAN11A1L157 253 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 J3KTA2 159 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 RPP38P78345 283 aaKnown RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 LAIR1Q6GTX8 287 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 NXPE4Q6UWF7 544 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 FAM20CQ8IXL6 584 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 C16orf78Q8WTQ4 265 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 PPP1R16AQ96I34 528 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 FEVQ99581 238 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TUBA1CQ9BQE3 449 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 LGR4Q9BXB1 951 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TBC1D23Q9NUY8 699 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 SLC23A2Q9UGH3 650 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TPRKBQ9Y3C4 175 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 OR1A2Q9Y585 309 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF106Q9H2Y7 1883 aaKnown RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 EDDM13A0A1B0GTR0 161 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 A0A1W2PRB8 838 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 IGLON5A6NGN9 336 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 ANKDD1BA6NHY2 528 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF99A8MXY4 864 aaPredicted RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 H7BY64 318 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 ZNF701M0R085 212 aaPredicted RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 MT-ND2P03891 347 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 ITGB7P26010 798 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 PTGER1P34995 402 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 CRYBA2P53672 197 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 PPIGQ13427 754 aaKnown RBP eCLIP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TOP3AQ13472 1001 aaPredicted RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TMEM240Q5SV17 173 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 GCNT6Q5T4J0 391 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 KIAA0907Q7Z7F0 614 aaPredicted RBP11.07□□□□□ -0.64
PTPN2-201ENST00000309660 AMZ2Q86W34 360 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 NRSN1Q8IZ57 195 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 SYNPOQ8N3V7 929 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 WFIKKN2Q8TEU8 576 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 PRAP1Q96NZ9 151 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 F2RL3Q96RI0 385 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 TMEM184CQ9NVA4 438 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 CXorf51AA0A1B0GTR3 108 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 C1orf226A1L170 272 aa11.07□□□□□ -0.64
PTPN2-201ENST00000309660 SLC16A6O15403 523 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms