RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 RPS21P63220 83 aaKnown RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 RAB31Q13636 194 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 GPRC6AQ5T6X5 926 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 STOML3Q8TAV4 291 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 NANPQ8TBE9 248 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 C1orf226A1L170 272 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 FAAHO00519 579 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ZNF217O75362 1048 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 GLUD1P00367 558 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 GNALP38405 381 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 MLLT6P55198 1093 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 HECTD2Q5U5R9 776 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 RAB11FIP2Q7L804 512 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TRAPPC5Q8IUR0 188 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 LACC1Q8IV20 430 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 KLHL32Q96NJ5 620 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SLC7A8Q9UHI5 535 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 MSRAQ9UJ68 235 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ADAM29Q9UKF5 820 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 FBXL3Q9UKT7 428 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 BACE2Q9Y5Z0 518 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 HEATR5BQ9P2D3 2071 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 RNF212BA8MTL3 300 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 IFNA10P01566 189 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 IFNA4P05014 189 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 UBCP0CG48 685 aaKnown RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 ITGB5P18084 799 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 PRKCDQ05655 676 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 PYDC2Q56P42 97 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ALG10Q5BKT4 473 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 DEF8Q6ZN54 512 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TMEM145Q8NBT3 493 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 CEP76Q8TAP6 659 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 HPSE2Q8WWQ2 592 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TMEM80Q96HE8 168 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 CD244Q9BZW8 370 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ISYNA1Q9NPH2 558 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 UBQLN2Q9UHD9 624 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SLC23A1Q9UHI7 598 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SLC6A5Q9Y345 797 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 DHRS7Q9Y394 339 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ZSWIM8A7E2V4 1837 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ARNTLO00327 626 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SNNO75324 88 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 IL1AP01583 271 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 IL12BP29460 328 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ARSFP54793 590 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SNAPC1Q16533 368 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 CLDN22Q8N7P3 220 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ZSCAN1Q8NBB4 408 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 OR8J2Q8NGG1 315 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ATG4CQ96DT6 458 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 IL4I1Q96RQ9 567 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SRA1Q9HD15 236 aaKnown RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 FUOMA2VDF0 154 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 CCDC85CA6NKD9 419 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ZBTB7AO95365 584 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 DEFB106AQ8N104 65 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 RSC1A1Q92681 617 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TCEAL4Q96EI5 215 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 LINGO1Q96FE5 620 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ATXN7L3BQ96GX2 97 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 HEBP1Q9NRV9 189 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 A0A0U1RQF3 1178 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ACOX3O15254 700 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TM4SF1P30408 202 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 IDH3AP50213 366 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 CYB5R2Q6BCY4 276 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 C6orf89Q6UWU4 347 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 LRP10Q7Z4F1 713 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ADGRG2Q8IZP9 1017 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 LINC00116Q8NCU8 138 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 CPB2Q96IY4 423 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 PCDHB18PQ96TA0 734 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 CWH43Q9H720 699 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SEC61A2Q9H9S3 476 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 ACSS1Q9NUB1 689 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 BTRCQ9Y297 605 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 OR10H1Q9Y4A9 318 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 OR6C70A6NIJ9 312 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 B4GALT5O43286 388 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 RNF13O43567 381 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 BPNT1O95861 308 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 MOCS2O96007 188 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 JUPP14923 745 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 HLCSP50747 726 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 GNG2P59768 71 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 DECR1Q16698 335 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 EMC4Q5J8M3 183 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 C9orf64Q5T6V5 341 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 UGT2A3Q6UWM9 527 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 TRAM1L1Q8N609 369 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 B3GNT7Q8NFL0 401 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 SMPDL3AQ92484 453 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 NUP50Q9UKX7 468 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 DPPA5A6NC42 116 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 DVL1O14640 695 aa3.89□□□□□ -1.79
USH2A-201ENST00000307340 DVL1P1P54792 670 aaPredicted RBP3.89□□□□□ -1.79
USH2A-201ENST00000307340 C1QTNF12Q5T7M4 302 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms