RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 DOK2O60496 412 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 AOC2O75106 756 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 APOC3P02656 99 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 OR12D1P0DN82 309 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 KLHL22Q53GT1 634 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 TMCO2Q7Z6W1 182 aaPredicted RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 THOC6Q86W42 341 aaKnown RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 TDRPQ86YL5 185 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 CPT1CQ8TCG5 803 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 BORCS8Q96FH0 119 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 MMP28Q9H239 520 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 MKKSQ9NPJ1 570 aaPredicted RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 FAM234BA2RU67 622 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 MANSC4A6NHS7 340 aaPredicted RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 GOSR2O14653 212 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 SCELO95171 688 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 PRSS56P0CW18 603 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 APLP1P51693 650 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 GALK2Q01415 458 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 CAP1Q01518 475 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 TAF1AQ15573 450 aaPredicted RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 FUT10Q6P4F1 479 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 CCDC116Q8IYX3 515 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 NPRL2Q8WTW4 380 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 SLC30A2Q9BRI3 323 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 LHX5Q9H2C1 402 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 KCNK12Q9HB15 430 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 EXTL2Q9UBQ6 330 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 ETV5P41161 510 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 AP1S1P61966 158 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 GPR157Q5UAW9 335 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 DNAAF1Q8NEP3 725 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 MUS81Q96NY9 551 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 ACSL6Q9UKU0 697 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 A0A0D9SEW6 157 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 C2CD4BA6NLJ0 364 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 CAPNS1P04632 268 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 SMPD1P17405 629 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 GJA5P36382 358 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 MAP2K5Q13163 448 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 GRB7Q14451 532 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 ZNF761Q86XN6 746 aaPredicted RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 M0QX08 132 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 WDPCPO95876 746 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 PAX3P23760 479 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 SP3Q02447 781 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 AIMP2Q13155 320 aaKnown RBP12.25□□□□□ -0.45
USP38-201ENST00000307017 CDNFQ49AH0 187 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 IQCF1Q8N6M8 205 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 PDPRQ8NCN5 879 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 NDNFQ8TB73 568 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 SHKBP1Q8TBC3 707 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 HDHD5Q9BXW7 423 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 KCND1Q9NSA2 647 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 TRPS1Q9UHF7 1281 aa12.25□□□□□ -0.45
USP38-201ENST00000307017 GPR4P46093 362 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 FBXO22Q8NEZ5 403 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 NCSTNQ92542 709 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ROPN1LQ96C74 230 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 PIP5K1AQ99755 562 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 RC3H2Q9HBD1 1191 aaKnown RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 SPATA7Q9P0W8 599 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 CNTN3Q9P232 1028 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 MGAT4CQ9UBM8 478 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 K7EPI3 171 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 DRD5P21918 477 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 LILRA4P59901 499 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 E2F1Q01094 437 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 NDUFA9Q16795 377 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 PPTC7Q8NI37 304 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ZNF675Q8TD23 568 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 MMABQ96EY8 250 aaPredicted RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 EPYCQ99645 322 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 LRRC3Q9BY71 257 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 RNF39Q9H2S5 420 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 STXBP5LQ9Y2K9 1186 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 PCDHGA6Q9Y5G7 932 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 PSAT1Q9Y617 370 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 SOCS7O14512 581 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 CLRN1P58418 232 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 GNG2P59768 71 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 FAM189BP81408 668 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 SP2Q02086 613 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 MAB21L1Q13394 359 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 LRIT3Q3SXY7 679 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 MFSD5Q6N075 450 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 C1orf21Q9H246 121 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 PIGVQ9NUD9 493 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 DIP2BQ9P265 1576 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 SOX1O00570 391 aaPredicted RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 CREG1O75629 220 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 NXPH3O95157 252 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 GSK3BP49841 420 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 SRYQ05066 204 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 RPS26P11Q5JNZ5 115 aaPredicted RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 ZC3H14Q6PJT7 736 aaKnown RBP12.24□□□□□ -0.45
USP38-201ENST00000307017 GPALPP1Q8IXQ4 340 aa12.24□□□□□ -0.45
USP38-201ENST00000307017 ZSCAN1Q8NBB4 408 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms