RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 GVINP1Q7Z2Y8 2422 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 POP7O75817 140 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 NPPAP01160 153 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 PRDX6P30041 224 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 POLR2JP52435 117 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CTBP2P56545 445 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 NFKB2Q00653 900 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 SLC25A11Q02978 314 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 LACTB2Q53H82 288 aaPredicted RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 LYSMD4Q5XG99 296 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CPSF7Q8N684 471 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 LMX1AQ8TE12 382 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 FGFBP2Q9BYJ0 223 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CKAP5Q14008 2032 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 IGFBP5P24593 272 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 AKR1D1P51857 326 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 RPS15AP62244 130 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CHIT1Q13231 466 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 SSX6Q7RTT6 188 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 OSTM1Q86WC4 334 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 TMEM126BQ8IUX1 230 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ARHGAP12Q8IWW6 846 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 SLC35B2Q8TB61 432 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CASD1Q96PB1 797 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 B3GNT4Q9C0J1 378 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 MED11Q9P086 117 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ABCD2Q9UBJ2 740 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 DNAJC13O75165 2243 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 PATJQ8NI35 1801 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 H3BNC9 293 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 EPHB6O15197 1021 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ITGA5P08648 1049 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 UBAP2Q5T6F2 1119 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 MANEALQ5VSG8 457 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 UNC5DQ6UXZ4 953 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 TSEN2Q8NCE0 465 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 MARK4Q96L34 752 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CMKLR1Q99788 373 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ZNF471Q9BX82 626 aaPredicted RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 IPPKQ9H8X2 491 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 NLE1Q9NVX2 485 aaPredicted RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 PDP1Q9P0J1 537 aaPredicted RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 NENFQ9UMX5 172 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ELOVL7A1L3X0 281 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 C5orf51A6NDU8 294 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ATP6V1G2O95670 118 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 FADS2O95864 444 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CFL1P23528 166 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 HERV-K104P61576 105 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 DAZLQ92904 295 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 SLC25A36Q96CQ1 311 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 SLC6A15Q9H2J7 730 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CLK4Q9HAZ1 481 aaKnown RBP8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 TMEM184CQ9NVA4 438 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 FLRT1Q9NZU1 646 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 ERVK-18Q9QC07 812 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 CIDEBQ9UHD4 219 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 LGALS13Q9UHV8 139 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 SIT1Q9Y3P8 196 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 WASF2Q9Y6W5 498 aa8.07□□□□□ -1.12
PCDHB1-201ENST00000306549 PROM1O43490 865 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CYP4B1P13584 511 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ANK1P16157 1881 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CCR10P46092 362 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 MCCD1P59942 119 aaPredicted RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CRADDP78560 199 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 HNRNPA1L2Q32P51 320 aaKnown RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 FSTL4Q6MZW2 842 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 LYSMD3Q7Z3D4 306 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 TRABD2AQ86V40 505 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 TMIEQ8NEW7 156 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 OR6N1Q8NGY5 312 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 MCFD2Q8NI22 146 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 UFD1Q92890 307 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 FGF13Q92913 245 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 NECAB3Q96P71 396 aaPredicted RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ZDHHC5Q9C0B5 715 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 DERL2Q9GZP9 239 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 METTL8Q9H825 291 aaKnown RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CHRAC1Q9NRG0 131 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ASB6Q9NWX5 421 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PCDHGA6Q9Y5G7 932 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 HTR3EA5X5Y0 456 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 MT-CYBP00156 380 aaPredicted RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ACP5P13686 325 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 MARCKSL1P49006 195 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 ARHGAP19Q14CB8 494 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CUZD1Q86UP6 607 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PLPP6Q8IY26 295 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PROKR2Q8NFJ6 384 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PYDC1Q8WXC3 89 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 CPT1BQ92523 772 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 NDRG1Q92597 394 aaKnown RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 IMP4Q96G21 291 aaKnown RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 BORCS6Q96GS4 357 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 PHF7Q9BWX1 381 aaPredicted RBP8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SLC17A9Q9BYT1 436 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 OR10A4Q9H209 315 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SEC61A2Q9H9S3 476 aa8.06□□□□□ -1.12
PCDHB1-201ENST00000306549 SIX2Q9NPC8 291 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms