RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 FLRT2O43155 660 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 CORO1AP31146 461 aaKnown RBP13□□□□□ -0.33
TRIM56-201ENST00000306085 HNF1BP35680 557 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 SLC1A5Q15758 541 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 TMEM220Q6QAJ8 160 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 KDELC1Q6UW63 502 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 NLRP8Q86W28 1048 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 HERVK_113Q902F9 699 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 B3GNT2Q9NY97 397 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 EPHA6Q9UF33 1036 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 PCDHB11Q9Y5F2 797 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 SOX2P48431 317 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 GPRC6AQ5T6X5 926 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 SMIM15Q7Z3B0 74 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 NLGN2Q8NFZ4 835 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 PCDHAC1Q9H158 963 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF334Q9HCZ1 680 aaPredicted RBP13□□□□□ -0.33
TRIM56-201ENST00000306085 ABCB8Q9NUT2 735 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 GPRC5BQ9NZH0 403 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 OTOFQ9HC10 1997 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 PRPS2P11908 318 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 XRCC1P18887 633 aaPredicted RBP13□□□□□ -0.33
TRIM56-201ENST00000306085 IRF5Q13568 498 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 NFKBIDQ8NI38 313 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 RGMAQ96B86 450 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF75AQ96N20 296 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 PLCXD1Q9NUJ7 323 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 BMP6P22004 513 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 GAD2Q05329 585 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 SLC35F1Q5T1Q4 408 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 LRRC38Q5VT99 294 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 UBQLNLQ8IYU4 475 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 FITM2Q8N6M3 262 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 NEIL3Q8TAT5 605 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 FAIMQ9NVQ4 179 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 RTTNQ86VV8 2226 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 SPDEFO95238 335 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 GOT2P00505 430 aaKnown RBP13□□□□□ -0.33
TRIM56-201ENST00000306085 AKR1A1P14550 325 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 CD79BP40259 229 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 PDSS1Q5T2R2 415 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 PRMT6Q96LA8 375 aaPredicted RBP13□□□□□ -0.33
TRIM56-201ENST00000306085 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13□□□□□ -0.338e-15■□□□□ 9.4
TRIM56-201ENST00000306085 PREBQ9HCU5 417 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 DHDHQ9UQ10 334 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 DOPEY2Q9Y3R5 2298 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 GP1BBP13224 206 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 TAS2R40P59535 323 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 DSC3Q14574 896 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 SLC36A4Q6YBV0 504 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 GTPBP8Q8N3Z3 284 aaPredicted RBP13□□□□□ -0.33
TRIM56-201ENST00000306085 ARL11Q969Q4 196 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 PAPOLGQ9BWT3 736 aaKnown RBP13□□□□□ -0.33
TRIM56-201ENST00000306085 CHRAC1Q9NRG0 131 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF358Q9NW07 568 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 IMPA2O14732 288 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 ARAFP10398 606 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 MRPS5P82675 430 aaKnown RBP12.99□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF681Q96N22 645 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 CCDC106Q9BWC9 280 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 OR51I1Q9H343 314 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 ANXA8P13928 327 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 EDNRBP24530 442 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 DSTNP60981 165 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 PIGGQ5H8A4 983 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 PHOSPHO1Q8TCT1 267 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 DNAJA3Q96EY1 480 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 SGCZQ96LD1 299 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF442Q9H7R0 627 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 PRMT8Q9NR22 394 aaPredicted RBP12.99□□□□□ -0.33
TRIM56-201ENST00000306085 TAS2R9Q9NYW1 312 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 ANKRD63C9JTQ0 380 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 CHRNB1P11230 501 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 PAPD4Q6PIY7 484 aaKnown RBP12.99□□□□□ -0.33
TRIM56-201ENST00000306085 SERPINA9Q86WD7 417 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 TMEM199Q8N511 208 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 GLB1L3Q8NCI6 653 aaPredicted RBP12.99□□□□□ -0.33
TRIM56-201ENST00000306085 OR6C4Q8NGE1 309 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 TMBIM1Q969X1 311 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 VRK1Q99986 396 aaPredicted RBP12.99□□□□□ -0.33
TRIM56-201ENST00000306085 ARMC1Q9NVT9 282 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 C11orf98E9PRG8 122 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 INMT-MINDY4F8WBC2 141 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 ENGP17813 658 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF767PQ75MW2 155 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 PXKQ7Z7A4 578 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 OR10Q1Q8NGQ4 319 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 A0A1W2PQ45 241 aaPredicted RBP12.99□□□□□ -0.33
TRIM56-201ENST00000306085 A0A1W2PQY0 241 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 A8MU76 341 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 CXCL14O95715 111 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 PLP2Q04941 152 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 SH3RF1Q7Z6J0 888 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 SMG8Q8ND04 991 aaKnown RBP12.99□□□□□ -0.33
TRIM56-201ENST00000306085 BTN2A3PQ96KV6 586 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 DOCK9Q9BZ29 2069 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 DUXAA6NLW8 204 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 KCNQ2O43526 872 aa12.99□□□□□ -0.33
TRIM56-201ENST00000306085 IL3P08700 152 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms