RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CXorf40BQ96DE9 158 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PYURFQ96I23 114 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 FBXL20Q96IG2 436 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PRPF18Q99633 342 aaKnown RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 MS4A8Q9BY19 250 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 FBRSQ9HAH7 460 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 KCNK12Q9HB15 430 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 LMCD1Q9NZU5 365 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 DNAJB9Q9UBS3 223 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 MOSPD1Q9UJG1 213 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 HEATR5BQ9P2D3 2071 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 PRICKLE3O43900 615 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 DEAF1O75398 565 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 GCM2O75603 506 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 CST1P01037 141 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ALPLP05186 524 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ABCB1P08183 1280 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 IL3P08700 152 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 NDUFV2P19404 249 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 DRD1P21728 446 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CCR8P51685 355 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ARSFP54793 590 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 REEP5Q00765 189 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CTBSQ01459 385 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 GRSF1Q12849 480 aaKnown RBP eCLIP6.26□□□□□ -1.41
USP47-201ENST00000305481 PPP1R8Q12972 351 aaKnown RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 RGNQ15493 299 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 RPE65Q16518 533 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 UAP1L1Q3KQV9 507 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 LIN52Q52LA3 116 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 COX20Q5RI15 118 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.26□□□□□ -1.41
USP47-201ENST00000305481 DEPDC1Q5TB30 811 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 FAM180BQ6P0A1 224 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 USP30Q70CQ3 517 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 UBE3DQ7Z6J8 389 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 SATL1Q86VE3 508 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 APLFQ8IW19 511 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 NAGSQ8N159 534 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 METTL25Q8N6Q8 603 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 FAM47BQ8NA70 645 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 OR52E1Q8NGJ3 308 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 GOT1L1Q8NHS2 421 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 RPLP0P6Q8NHW5 317 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 SNX19Q92543 992 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 MAL2Q969L2 176 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 PDXPQ96GD0 296 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 BMFQ96LC9 184 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 NECTIN4Q96NY8 510 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 AICDAQ9GZX7 198 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ABCG4Q9H172 646 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 MAGIXQ9H6Y5 334 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 C8orf4Q9NR00 106 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 SMPD3Q9NY59 655 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 CD207Q9UJ71 328 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ICKQ9UPZ9 632 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 PLXND1Q9Y4D7 1925 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 PRSS38A1L453 326 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 TMEM229AB2RXF0 380 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CCNDBP1O95273 360 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 C6orf47O95873 294 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 SEMG1P04279 462 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 NTRK1P04629 796 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CD72P21854 359 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 MYF6P23409 242 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 PKLRP30613 574 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 MAGEA2P43356 314 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 RAB28P51157 221 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CLCN2P51788 898 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CASP9P55211 416 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ADARB1P78563 741 aaKnown RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 PRDX1Q06830 199 aaKnown RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 TCEA2Q15560 299 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 VPS37AQ8NEZ2 397 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 OR4A15Q8NGL6 344 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ASB12Q8WXK4 309 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 OR1E3Q8WZA6 343 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 AIF1LQ9BQI0 150 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 C1QTNF7Q9BXJ2 289 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 PCBD2Q9H0N5 130 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 SYNPO2LQ9H987 977 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 TAAR2Q9P1P5 351 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 TBC1D29Q9UFV1 150 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 SCML1Q9UN30 329 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 MAPRE3Q9UPY8 281 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 ANKDD1BA6NHY2 528 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 G3V2T6 193 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 H3BNH8 94 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 CACNB4O00305 520 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 PPM1DO15297 605 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 NARSO43776 548 aaKnown RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 GPR37L1O60883 481 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 H6PDO95479 791 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 HOXB3P14651 431 aaPredicted RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 PEBP1P30086 187 aaKnown RBP6.26□□□□□ -1.41
USP47-201ENST00000305481 KDELR2P33947 212 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 BMP8BP34820 402 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 TPMTP51580 245 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 PHEXP78562 749 aa6.26□□□□□ -1.41
USP47-201ENST00000305481 MRPS21P82921 87 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms