RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 ARMC1Q9NVT9 282 aa12.4□□□□□ -0.42
VAT1L-201ENST00000302536 ZNF490Q9ULM2 529 aaPredicted RBP12.4□□□□□ -0.42
VAT1L-201ENST00000302536 YARS2Q9Y2Z4 477 aaKnown RBP12.4□□□□□ -0.42
VAT1L-201ENST00000302536 OR51B4Q9Y5P0 310 aa12.4□□□□□ -0.42
VAT1L-201ENST00000302536 COL4A6Q14031 1691 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 A0A1W2PP18 115 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 ALX3O95076 343 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 SDHBP21912 280 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 SLC6A11P48066 632 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 TYSND1Q2T9J0 566 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 CARD16Q5EG05 197 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 FUNDC1Q8IVP5 155 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 PIGKQ92643 395 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 MED30Q96HR3 178 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 PSD2Q9BQI7 771 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 ACAT2Q9BWD1 397 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 FAM126AQ9BYI3 521 aaPredicted RBP12.39□□□□□ -0.43
VAT1L-201ENST00000302536 OR51E2Q9H255 320 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 SAGE1Q9NXZ1 904 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 TAS2R16Q9NYV7 291 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 TAS2R9Q9NYW1 312 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 OPTCQ9UBM4 332 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 IFRD1O00458 451 aaPredicted RBP12.39□□□□□ -0.43
VAT1L-201ENST00000302536 GREM1O60565 184 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 C9P02748 559 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 ESR1P03372 595 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 CDH12P55289 794 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 ERVPABLB-1P60509 514 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 GPLD1P80108 840 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 KRR1Q13601 381 aaKnown RBP12.39□□□□□ -0.43
VAT1L-201ENST00000302536 TSTQ16762 297 aaKnown RBP12.39□□□□□ -0.43
VAT1L-201ENST00000302536 PYCR3Q53H96 274 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 ZBTB2Q8N680 514 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 KBTBD8Q8NFY9 601 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 RHOXF1Q8NHV9 184 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 FIBINQ8TAL6 211 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 SPPL3Q8TCT6 385 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 DOK1Q99704 481 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 DPH2Q9BQC3 489 aaPredicted RBP12.39□□□□□ -0.43
VAT1L-201ENST00000302536 DERL2Q9GZP9 239 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 CPNE5Q9HCH3 593 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 IL1RAPQ9NPH3 570 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 BBIP1A8MTZ0 92 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 STSP08842 583 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 HNF4AP41235 474 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 GP2P55259 537 aaKnown RBP12.39□□□□□ -0.43
VAT1L-201ENST00000302536 SNAPC1Q16533 368 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 BCL7AQ4VC05 210 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 SYTL3Q4VX76 610 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 TMEM240Q5SV17 173 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 NXNL2Q5VZ03 156 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.39□□□□□ -0.43
VAT1L-201ENST00000302536 OR6C4Q8NGE1 309 aa12.39□□□□□ -0.43
VAT1L-201ENST00000302536 CHD9Q3L8U1 2897 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 SOX14O95416 240 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 HIST1H2AGP0C0S8 130 aaPredicted RBP12.38□□□□□ -0.43
VAT1L-201ENST00000302536 HIST1H2ADP20671 130 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 PBX2P40425 430 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 DNAJB13P59910 316 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 GRSF1Q12849 480 aaKnown RBP eCLIP12.38□□□□□ -0.43
VAT1L-201ENST00000302536 GTF2H2Q13888 395 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 TMEM215Q68D42 235 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 GTF2H2CQ6P1K8 395 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 PAMR1Q6UXH9 720 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 Q6ZNB5 142 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 HTR3DQ70Z44 454 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 RRM2BQ7LG56 351 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 SNX20Q7Z614 316 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 HMGN2P46Q86SG4 172 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 KAT2AQ92830 837 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 HIST1H2AHQ96KK5 128 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 HIST1H2AJQ99878 128 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 H2AFJQ9BTM1 129 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 DNAJB9Q9UBS3 223 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.38□□□□□ -0.43
VAT1L-201ENST00000302536 A0A1B0GVC2 190 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 A6NIN4 97 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 H3BM21 787 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 COX7A2P14406 83 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 RPL6Q02878 288 aaKnown RBP12.38□□□□□ -0.43
VAT1L-201ENST00000302536 CBLBQ13191 982 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 PPIGQ13427 754 aaKnown RBP eCLIP12.38□□□□□ -0.43
VAT1L-201ENST00000302536 TOP3AQ13472 1001 aaPredicted RBP12.38□□□□□ -0.43
VAT1L-201ENST00000302536 STARD3Q14849 445 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 BTBD16Q32M84 506 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 GPRC6AQ5T6X5 926 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 UBE2R2Q712K3 238 aaPredicted RBP12.38□□□□□ -0.43
VAT1L-201ENST00000302536 GOLGA7Q7Z5G4 137 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 HSD11B1LQ7Z5J1 315 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 NRARPQ7Z6K4 114 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 PROSER1Q86XN7 944 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 TRAPPC5Q8IUR0 188 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 SYT12Q8IV01 421 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 VRK3Q8IV63 474 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 TADA1Q96BN2 335 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 TXNDC15Q96J42 360 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 LRRC3BQ96PB8 259 aa12.38□□□□□ -0.43
VAT1L-201ENST00000302536 CHIAQ9BZP6 476 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms