RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CRTC1Q6UUV9 634 aa13.55□□□□□ -0.24
SDC2-201ENST00000302190 DLEU7Q6UYE1 221 aa13.55□□□□□ -0.24
SDC2-201ENST00000302190 SLC39A5Q6ZMH5 540 aa13.55□□□□□ -0.24
SDC2-201ENST00000302190 SLC5A8Q8N695 610 aa13.55□□□□□ -0.24
SDC2-201ENST00000302190 ZNF548Q8NEK5 533 aaPredicted RBP13.55□□□□□ -0.24
SDC2-201ENST00000302190 TRMT61BQ9BVS5 477 aaKnown RBP13.55□□□□□ -0.24
SDC2-201ENST00000302190 FNDC11Q9BVV2 318 aa13.55□□□□□ -0.24
SDC2-201ENST00000302190 ASPDHA6ND91 283 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 FADS2P1A8MWK0 482 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 ITGA2P17301 1181 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 BEND5Q7L4P6 421 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 NPAS3Q8IXF0 933 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 TRUB1Q8WWH5 349 aaKnown RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 SH3YL1Q96HL8 342 aaPredicted RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 CFHR5Q9BXR6 569 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 ITPAQ9BY32 194 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 SLC2A11Q9BYW1 496 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 DCAF13Q9NV06 445 aaKnown RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 COMMD3Q9UBI1 195 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 WBP11Q9Y2W2 641 aaKnown RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 DNAH14Q0VDD8 3507 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 GRM6O15303 877 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 CACNG3O60359 315 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 CLCN7P51798 805 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 UGT2B15P54855 530 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 CLDN8P56748 225 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 CDK6Q00534 326 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 GRIK2Q13002 908 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 CTU2Q2VPK5 515 aaKnown RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 CARD16Q5EG05 197 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 COQ5Q5HYK3 327 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 KLHL17Q6TDP4 642 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 TEX26Q8N6G2 289 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 CITED4Q96RK1 184 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 TBC1D17Q9HA65 648 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 HNRNPCL2B2RXH8 293 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 TNFRSF10AO00220 468 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 ACOX3O15254 700 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 NPPAP01160 153 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 PSMA1P25786 263 aaKnown RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 KLHL12Q53G59 568 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 NEK10Q6ZWH5 1172 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 USP30Q70CQ3 517 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 VN1R5Q7Z5H4 357 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 DSG4Q86SJ6 1040 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 TMEM25Q86YD3 366 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 Q8N9G6 341 aaPredicted RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 EFHD2Q96C19 240 aaPredicted RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 REPS1Q96D71 796 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 SORBS1Q9BX66 1292 aaKnown RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 TM9SF3Q9HD45 589 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 SLC6A13Q9NSD5 602 aa13.54□□□□□ -0.24
SDC2-201ENST00000302190 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
SDC2-201ENST00000302190 CENPXA8MT69 81 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 GUCY1B2O75343 617 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 CCNB2O95067 398 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 ASMTP46597 345 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 NKG7Q16617 165 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 NEK5Q6P3R8 708 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 C22orf39Q6P5X5 142 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 DHRS4L2Q6PKH6 230 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 CEACAM20Q6UY09 585 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 GDPD4Q6W3E5 623 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 TMEM179BQ7Z7N9 219 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 VRK3Q8IV63 474 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 RAB42Q8N4Z0 105 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 TBX5Q99593 518 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 OR51E2Q9H255 320 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 INTS6Q9UL03 887 aaKnown RBP13.53□□□□□ -0.24
SDC2-201ENST00000302190 CLEC4EQ9ULY5 219 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 PLOD3O60568 738 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 LEFTY1O75610 366 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 C8orf89P0DMQ9 161 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 TUBA3CQ13748 450 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 E2F2Q14209 437 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 EXOC3L2Q2M3D2 409 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 LY6G5CQ5SRR4 150 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 DCST1Q5T197 706 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 ATG9BQ674R7 924 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 ADNP2Q6IQ32 1131 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 SMARCD3Q6STE5 483 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 RNFT2Q96EX2 444 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 POLR2J3Q9H1A7 115 aaKnown RBP13.53□□□□□ -0.24
SDC2-201ENST00000302190 SAGE1Q9NXZ1 904 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 SLC9A8Q9Y2E8 581 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 MRPS23Q9Y3D9 190 aaKnown RBP13.53□□□□□ -0.24
SDC2-201ENST00000302190 CASKO14936 926 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 OR1F1O43749 312 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 TLX2O43763 284 aaPredicted RBP13.53□□□□□ -0.24
SDC2-201ENST00000302190 GNRH1P01148 92 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 MLLT1Q03111 559 aaPredicted RBP13.53□□□□□ -0.24
SDC2-201ENST00000302190 IL18R1Q13478 541 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 FAM209AQ5JX71 171 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 CATSPEREQ5SY80 951 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 TMPRSS11AQ6ZMR5 421 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 TCEANCQ8N8B7 351 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 OR13F1Q8NGS4 319 aa13.53□□□□□ -0.24
SDC2-201ENST00000302190 ZCCHC2Q9C0B9 1178 aaKnown RBP13.53□□□□□ -0.24
SDC2-201ENST00000302190 CARS2Q9HA77 564 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms